myRT

myRT report for GCA_002754055.1_ASM275405v1

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Seq: CP024593.1 Porphyromonas gingivalis strain KCOM 2804 chromosome, complete genome (2463791 bp)
Overview 1 RT 1: 1047575-1053252 bp 2 RT 2: 1683231-1692613 bp Neighborhood of RT #1 [1047575, 1053491] DUF1661 Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cmr6_III-B cas_Cmr5 Neighborhood of RT #2 [1683231, 1692613] GATase1_2 rDP_like InsA RVT-UG8 RVT-UG3 Feature: gene Location: 1047575-1047745 bp Ori: ATR94397.1 Feature: domain Description: DUF1661 Location: 1047578-1047668 bp Feature: domain Description: DUF1 661 Location: 1 047578-1 047668 bp Feature: gene Location: 1048823-1049113 bp Ori: ATR94398.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 1048844-1049063 bp Feature: domain Description: Cas2_I_II_III Location: 1 048844-1 049063 bp Feature: gene Location: 1049133-1052228 bp Ori: ATR94399.1 Gene: cas1 Feature: domain Description: CRISPR_Cas6 Location: 1049667-1050021 bp Feature: domain Description: CRISPR_Cas6 Location: 1 049667-1 050021 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1050171-1050783 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 0501 71 -1 050783 bp Feature: domain Description: Cas1_I-II-III Location: 1051233-1052187 bp Feature: domain Description: Cas1 _I-II-III Location: 1 051 233-1 0521 87 bp Feature: gene Location: 1052284-1053057 bp Ori: ATR94400.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 1052359-1053040 bp Feature: domain Description: Cmr6_III-B Location: 1 052359-1 053040 bp Feature: gene Location: 1053054-1053491 bp Ori: ATR94401.1 Feature: domain Description: cas_Cmr5 Location: 1053093-1053252 bp Feature: domain Description: cas_Cmr5 Location: 1 053093-1 053252 bp Feature: gene Location: 1683231-1685039 bp Ori: ATR94881.1 Feature: domain Description: GATase1_2 Location: 1683366-1684026 bp Feature: domain Description: GATase1 _2 Location: 1 683366-1 684026 bp Feature: domain Description: rDP_like Location: 1684077-1685004 bp Feature: domain Description: rDP_like Location: 1 684077-1 685004 bp Feature: gene Location: 1685915-1686859 bp Ori: ATR94882.1 Feature: domain Description: InsA Location: 1685924-1686059 bp Feature: domain Description: InsA Location: 1 685924-1 686059 bp Feature: gene Location: 1687586-1689775 bp Ori: ATR94883.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1688207-1688660 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 688207-1 688660 bp Feature: gene Location: 1689766-1691229 bp Ori: ATR94884.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1690222-1690753 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 690222-1 690753 bp Feature: gene Location: 1691326-1692108 bp Feature: gene Location: 1692098-1692613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1661 (pfam07877), Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881), GATase1_2 (cd01745), rDP_like (cd01301), InsA (COG3677)
RVT-UG8, RVT-UG3