myRT

myRT report for GCA_002754095.1_ASM275409v1

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Seq: CP024595.1 Porphyromonas gingivalis strain KCOM 3001 chromosome, complete genome (2353520 bp)
Overview 1 RT 1: 2311780-2317447 bp Neighborhood of RT #1 [2311780, 2317524] cas_Cmr5 Cmr6_III-B CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III DUF1661 Feature: gene Location: 2311780-2312223 bp Ori: ATR99474.1 Feature: domain Description: cas_Cmr5 Location: 2311819-2312149 bp Feature: domain Description: cas_Cmr5 Location: 231 1 81 9-231 21 49 bp Feature: gene Location: 2312220-2312966 bp Ori: ATR99475.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 2312295-2312949 bp Feature: domain Description: Cmr6_III-B Location: 231 2295-231 2949 bp Feature: gene Location: 2313022-2316117 bp Ori: ATR99476.1 Gene: cas1 Feature: domain Description: CRISPR_Cas6 Location: 2313556-2313910 bp Feature: domain Description: CRISPR_Cas6 Location: 231 3556-231 391 0 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2314060-2314672 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 231 4060-231 4672 bp Feature: domain Description: Cas1_I-II-III Location: 2315122-2316076 bp Feature: domain Description: Cas1 _I-II-III Location: 231 51 22-231 6076 bp Feature: gene Location: 2316137-2316427 bp Ori: ATR99477.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 2316158-2316377 bp Feature: domain Description: Cas2_I_II_III Location: 231 61 58-231 6377 bp Feature: gene Location: 2317354-2317524 bp Ori: ATR99478.1 Feature: domain Description: DUF1661 Location: 2317357-2317447 bp Feature: domain Description: DUF1 661 Location: 231 7357-231 7447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas_Cmr5 (TIGR01881), Cmr6_III-B (cd09661), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), DUF1661 (pfam07877)