myRT

myRT report for GCA_002754115.1_ASM275411v1

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Seq: CP024597.1 Porphyromonas gingivalis strain KCOM 2796 chromosome, complete genome (2476166 bp)
Overview 1 RT 1: 1667437-1672978 bp 2 RT 2: 2196100-2202138 bp Neighborhood of RT #1 [1667437, 1673439] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 Neighborhood of RT #2 [2196100, 2202227] DUF4141 Bac_Flav_CT_G RVT-GII Bac_Flav_CT_G DUF4133 Feature: gene Location: 1667437-1667772 bp Ori: ATS02821.1 Feature: domain Description: DUF4133 Location: 1667449-1667716 bp Feature: domain Description: DUF41 33 Location: 1 667449-1 66771 6 bp Feature: gene Location: 1667769-1669870 bp Feature: domain Description: Bac_Flav_CT_G Location: 1667772-1668750 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 667772-1 668750 bp Feature: gene Location: 1670417-1672228 bp Ori: ATS02822.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1670681-1671503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 670681 -1 671 503 bp Feature: domain Description: Intron_maturas2 Location: 1671587-1671902 bp Feature: domain Description: Intron_maturas2 Location: 1 671 587-1 671 902 bp Feature: domain Description: HNHc Note: nucleases Location: 1672049-1672199 bp Feature: domain Description: HNHc Note: nucleases Location: 1 672049-1 6721 99 bp Feature: gene Location: 1672333-1672782 bp Feature: domain Description: Bac_Flav_CT_G Location: 1672336-1672750 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 672336-1 672750 bp Feature: gene Location: 1672810-1673439 bp Ori: ATS02823.1 Feature: domain Description: DUF4141 Location: 1672822-1672978 bp Feature: domain Description: DUF41 41 Location: 1 672822-1 672978 bp Feature: gene Location: 2196100-2196711 bp Ori: ATS03238.1 Feature: domain Description: DUF4141 Location: 2196103-2196250 bp Feature: domain Description: DUF41 41 Location: 21 961 03-21 96250 bp Feature: gene Location: 2196879-2197325 bp Ori: ATS03239.1 Feature: domain Description: Bac_Flav_CT_G Location: 2196897-2197320 bp Feature: domain Description: Bac_Flav_CT_G Location: 21 96897-21 97320 bp Feature: gene Location: 2197403-2199213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2197667-2198042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 97667-21 98042 bp Feature: gene Location: 2199787-2201853 bp Feature: domain Description: Bac_Flav_CT_G Location: 2199790-2201854 bp Feature: domain Description: Bac_Flav_CT_G Location: 21 99790-2201 854 bp Feature: gene Location: 2201850-2202227 bp Ori: ATS03240.1 Feature: domain Description: DUF4133 Location: 2201868-2202138 bp Feature: domain Description: DUF41 33 Location: 2201 868-22021 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)