myRT

myRT report for GCA_002761255.1_ASM276125v1

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Seq: CP017792.1 Enterococcus faecium strain E240 chromosome, complete genome (2868375 bp)
Overview 1 RT 1: 255585-272478 bp 2 RT 2: 416752-423584 bp 3 RT 3: 2694380-2713607 bp 4 RT 4: 2773730-2778331 bp Neighborhood of RT #1 [255585, 272478] FtsK RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Neighborhood of RT #2 [416752, 423592] CcmA AcrR RVT-GII GIIM CE4_DAC_u3_5s PRK13354 Neighborhood of RT #3 [2694380, 2713607] FtsK RVT-GII HNHc Zeta_toxin HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 Neighborhood of RT #4 [2773730, 2778339] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 HTH_XRE Feature: gene Location: 255585-256712 bp Feature: domain Description: FtsK Location: 256194-256707 bp Feature: domain Description: FtsK Location: 2561 94-256707 bp Feature: gene Location: 257096-257326 bp Feature: gene Location: 257445-259304 bp Ori: ATT99167.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257754-258495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257754-258495 bp Feature: domain Description: HNHc Note: nucleases Location: 259050-259188 bp Feature: domain Description: HNHc Note: nucleases Location: 259050-2591 88 bp Feature: gene Location: 259398-259682 bp Feature: gene Location: 259685-259838 bp Feature: gene Location: 259861-261066 bp Ori: ATT99169.1 Feature: domain Description: HTH_XRE Location: 259906-260050 bp Feature: domain Description: HTH_XRE Location: 259906-260050 bp Feature: domain Description: Rol_Rep_N Location: 260077-260344 bp Feature: domain Description: Rol_Rep_N Location: 260077-260344 bp Feature: domain Description: Rep_trans Location: 260368-260977 bp Feature: domain Description: Rep_trans Location: 260368-260977 bp Feature: gene Location: 261850-263760 bp Ori: ATT99170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262183-262921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2621 83-262921 bp Feature: domain Description: HNHc Note: nucleases Location: 263476-263641 bp Feature: domain Description: HNHc Note: nucleases Location: 263476-263641 bp Feature: gene Location: 263864-264088 bp Feature: gene Location: 264205-264702 bp Ori: ATT99172.1 Feature: domain Description: ArdA Location: 264223-264688 bp Feature: domain Description: ArdA Location: 264223-264688 bp Feature: gene Location: 264789-265181 bp Ori: ATT99173.1 Feature: domain Description: TcpE Location: 264807-265107 bp Feature: domain Description: TcpE Location: 264807-2651 07 bp Feature: gene Location: 265165-266715 bp Feature: domain Description: AAA_10 Location: 266497-266683 bp Feature: domain Description: AAA_1 0 Location: 266497-266683 bp Feature: gene Location: 267415-269241 bp Ori: ATT99174.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267715-268414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26771 5-26841 4 bp Feature: gene Location: 269354-270292 bp Feature: domain Description: AAA_10 Location: 269360-270260 bp Feature: domain Description: AAA_1 0 Location: 269360-270260 bp Feature: gene Location: 270295-272478 bp Feature: gene Location: 416752-417633 bp Ori: ATT99305.1 Feature: domain Description: CcmA Location: 416755-417625 bp Feature: domain Description: CcmA Location: 41 6755-41 7625 bp Feature: gene Location: 417888-418487 bp Ori: ATT99306.1 Feature: domain Description: AcrR Location: 417906-418392 bp Feature: domain Description: AcrR Location: 41 7906-41 8392 bp Feature: gene Location: 418974-420362 bp Ori: ATT99307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419295-419910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 9295-41 991 0 bp Feature: domain Description: GIIM Note: maturase Location: 419967-420183 bp Feature: domain Description: GIIM Note: maturase Location: 41 9967-4201 83 bp Feature: gene Location: 420455-421756 bp Ori: ATT99308.1 Feature: domain Description: CE4_DAC_u3_5s Location: 421124-421514 bp Feature: domain Description: CE4_DAC_u3_5s Location: 421 1 24-421 51 4 bp Feature: gene Location: 422336-423592 bp Ori: ATT99309.1 Feature: domain Description: PRK13354 Location: 422339-423584 bp Feature: domain Description: PRK1 3354 Location: 422339-423584 bp Feature: gene Location: 2694380-2695507 bp Feature: domain Description: FtsK Location: 2695040-2695502 bp Feature: domain Description: FtsK Location: 2695040-2695502 bp Feature: gene Location: 2695891-2696121 bp Feature: gene Location: 2696240-2698099 bp Ori: ATU01354.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2696549-2697290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2696549-2697290 bp Feature: domain Description: HNHc Note: nucleases Location: 2697845-2697983 bp Feature: domain Description: HNHc Note: nucleases Location: 2697845-2697983 bp Feature: gene Location: 2698193-2698432 bp Feature: gene Location: 2698510-2699184 bp Ori: ATU01356.1 Feature: domain Description: Zeta_toxin Location: 2698609-2699092 bp Feature: domain Description: Zeta_toxin Location: 2698609-2699092 bp Feature: gene Location: 2701098-2702282 bp Ori: ATU01359.1 Feature: domain Description: HTH_XRE Location: 2701128-2701272 bp Feature: domain Description: HTH_XRE Location: 2701 1 28-2701 272 bp Feature: domain Description: Rol_Rep_N Location: 2701305-2701569 bp Feature: domain Description: Rol_Rep_N Location: 2701 305-2701 569 bp Feature: domain Description: Rep_trans Location: 2701593-2702205 bp Feature: domain Description: Rep_trans Location: 2701 593-2702205 bp Feature: gene Location: 2702297-2702416 bp Ori: ATU01360.1 Feature: domain Description: DUF3789 Location: 2702306-2702399 bp Feature: domain Description: DUF3789 Location: 2702306-2702399 bp Feature: gene Location: 2703162-2705072 bp Ori: ATU01361.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2703495-2704233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2703495-2704233 bp Feature: domain Description: HNHc Note: nucleases Location: 2704788-2704953 bp Feature: domain Description: HNHc Note: nucleases Location: 2704788-2704953 bp Feature: gene Location: 2705413-2705916 bp Ori: ATU01362.1 Feature: domain Description: ArdA Location: 2705431-2705902 bp Feature: domain Description: ArdA Location: 2705431 -2705902 bp Feature: gene Location: 2705976-2706365 bp Ori: ATU01363.1 Feature: domain Description: TcpE Location: 2705994-2706294 bp Feature: domain Description: TcpE Location: 2705994-2706294 bp Feature: gene Location: 2706352-2707899 bp Feature: domain Description: AAA_10 Location: 2707681-2707864 bp Feature: domain Description: AAA_1 0 Location: 2707681 -2707864 bp Feature: gene Location: 2708599-2710425 bp Ori: ATU01364.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2708899-2709598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2708899-2709598 bp Feature: gene Location: 2710538-2711479 bp Feature: domain Description: AAA_10 Location: 2710544-2711444 bp Feature: domain Description: AAA_1 0 Location: 271 0544-271 1 444 bp Feature: gene Location: 2711484-2713607 bp Feature: gene Location: 2773730-2774989 bp Ori: ATU01417.1 Feature: domain Description: PRK09290 Location: 2773736-2774981 bp Feature: domain Description: PRK09290 Location: 2773736-2774981 bp Feature: gene Location: 2775105-2775419 bp Ori: ATU01418.1 Feature: domain Description: AlbA_2 Location: 2775144-2775315 bp Feature: domain Description: AlbA_2 Location: 27751 44-277531 5 bp Feature: gene Location: 2775565-2777061 bp Ori: ATU01586.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2775973-2776429 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2775973-2776429 bp Feature: gene Location: 2777239-2777718 bp Ori: ATU01419.1 Feature: domain Description: DUF3841 Location: 2777248-2777623 bp Feature: domain Description: DUF3841 Location: 2777248-2777623 bp Feature: gene Location: 2778094-2778339 bp Ori: ATU01420.1 Feature: domain Description: HTH_XRE Location: 2778145-2778331 bp Feature: domain Description: HTH_XRE Location: 27781 45-2778331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), ArdA (pfam07275), TcpE (pfam12648), AAA_10 (pfam12846), CcmA (COG4133)
AcrR (COG1309), GIIM (pfam08388), CE4_DAC_u3_5s (cd10972), PRK13354 (tyrosyl-tRNA synthetase; Provisional), Zeta_toxin (pfam06414), DUF3789 (pfam12664), PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)