myRT

myRT report for GCA_002761315.1_ASM276131v1

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Seq: CP017994.1 Klebsiella pneumoniae strain P1428, complete genome (5633290 bp)
Overview 1 RT 1: 1166720-1173202 bp 2 RT 2: 3525109-3530584 bp 3 RT 3: 5025435-5032310 bp 4 RT 4: 5102139-5107556 bp Neighborhood of RT #1 [1166720, 1173204] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [3525109, 3530598] HTH_XRE HTH_XRE RVT-UG2 traC_PFL_4706 conj_conj_conj_TIGR03751 Neighborhood of RT #3 [5025435, 5032435] FhlA EAL YncE YncE RVT-GII PRK10597 LexA_DNA_bind Neighborhood of RT #4 [5102139, 5107558] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 1166720-1167778 bp Ori: ATU10343.1 Feature: domain Description: YccC Location: 1166726-1167764 bp Feature: domain Description: YccC Location: 1 1 66726-1 1 67764 bp Feature: gene Location: 1167877-1168350 bp Ori: ATU10344.1 Feature: domain Description: PRK10016 Location: 1167880-1168339 bp Feature: domain Description: PRK1 001 6 Location: 1 1 67880-1 1 68339 bp Feature: gene Location: 1168432-1169916 bp Ori: ATU10345.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1168834-1169524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 68834-1 1 69524 bp Feature: gene Location: 1170436-1171599 bp Ori: ATU14358.1 Feature: domain Description: dacD Location: 1170439-1171594 bp Feature: domain Description: dacD Location: 1 1 70439-1 1 71 594 bp Feature: gene Location: 1171780-1173204 bp Ori: ATU10346.1 Feature: domain Description: SbcB Location: 1171786-1173202 bp Feature: domain Description: SbcB Location: 1 1 71 786-1 1 73202 bp Feature: gene Location: 3525109-3525339 bp Ori: ATU12459.1 Feature: domain Description: HTH_XRE Location: 3525151-3525319 bp Feature: domain Description: HTH_XRE Location: 35251 51 -352531 9 bp Feature: gene Location: 3525422-3525649 bp Ori: ATU12460.1 Feature: domain Description: HTH_XRE Location: 3525464-3525626 bp Feature: domain Description: HTH_XRE Location: 3525464-3525626 bp Feature: gene Location: 3525847-3527124 bp Ori: ATU12461.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3526045-3526831 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3526045-3526831 bp Feature: gene Location: 3527612-3530242 bp Ori: ATU12462.1 Feature: domain Description: traC_PFL_4706 Location: 3527651-3530231 bp Feature: domain Description: traC_PFL_4706 Location: 3527651 -3530231 bp Feature: gene Location: 3530239-3530598 bp Ori: ATU12463.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 3530257-3530584 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 3530257-3530584 bp Feature: gene Location: 5025435-5027198 bp Ori: ATU13762.1 Feature: domain Description: FhlA Location: 5025504-5025897 bp Feature: domain Description: FhlA Location: 5025504-5025897 bp Feature: domain Description: EAL Location: 5026440-5027154 bp Feature: domain Description: EAL Location: 5026440-50271 54 bp Feature: gene Location: 5027542-5028903 bp Ori: ATU13763.1 Feature: domain Description: YncE Location: 5027950-5028358 bp Feature: domain Description: YncE Location: 5027950-5028358 bp Feature: domain Description: YncE Location: 5028427-5028847 bp Feature: domain Description: YncE Location: 5028427-5028847 bp Feature: gene Location: 5029904-5031388 bp Ori: ATU13764.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5030306-5030996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5030306-5030996 bp Feature: gene Location: 5031467-5031700 bp Ori: ATU13765.1 Feature: domain Description: PRK10597 Location: 5031470-5031695 bp Feature: domain Description: PRK1 0597 Location: 5031 470-5031 695 bp Feature: gene Location: 5032106-5032435 bp Ori: ATU14490.1 Feature: domain Description: LexA_DNA_bind Location: 5032121-5032310 bp Feature: domain Description: LexA_DNA_bind Location: 50321 21 -503231 0 bp Feature: gene Location: 5102139-5103278 bp Ori: ATU13831.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 5102322-5103222 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 51 02322-51 03222 bp Feature: gene Location: 5103449-5103691 bp Ori: ATU13832.1 Feature: domain Description: DinI Location: 5103500-5103680 bp Feature: domain Description: DinI Location: 51 03500-51 03680 bp Feature: gene Location: 5104308-5105792 bp Ori: ATU13833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5104710-5105400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 0471 0-51 05400 bp Feature: gene Location: 5105871-5106290 bp Ori: ATU13834.1 Feature: domain Description: PRK10276 Location: 5105874-5106285 bp Feature: domain Description: PRK1 0276 Location: 51 05874-51 06285 bp Feature: gene Location: 5106293-5107558 bp Ori: ATU13835.1 Feature: domain Description: umuC Location: 5106296-5107556 bp Feature: domain Description: umuC Location: 51 06296-51 07556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), HTH_XRE (smart00530), RVT-UG2, traC_PFL_4706 (TIGR03744), conj_conj_conj_TIGR03751, FhlA (COG3604)
EAL (smart00052), YncE (COG3391), PRK10597 (DNA damage-inducible protein I; Provisional), LexA_DNA_bind (pfam01726), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)