myRT

myRT report for GCA_002761515.1_ASM276151v1

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Seq: CP018056.1 Klebsiella pneumoniae subsp. pneumoniae strain H11, complete genome (5316818 bp)
Overview 1 RT 1: 10649-15367 bp 2 RT 2: 1403407-1410465 bp 3 RT 3: 1661687-1667051 bp 4 RT 4: 4555739-4564369 bp Neighborhood of RT #1 [10649, 15531] PinE RVT-GII PRK10276 Neighborhood of RT #2 [1403407, 1410465] umuC PRK10276 RVT-GII PinE Neighborhood of RT #3 [1661687, 1667107] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [4555739, 4564374] FimC FimD RVT-UG4 PRK09692 YqgA Feature: gene Location: 10649-11590 bp Feature: gene Location: 12398-12946 bp Ori: ATU14527.1 Feature: domain Description: PinE Location: 12401-12938 bp Feature: domain Description: PinE Location: 1 2401 -1 2938 bp Feature: gene Location: 13403-14887 bp Ori: ATU14528.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13805-14495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3805-1 4495 bp Feature: gene Location: 14964-15203 bp Feature: gene Location: 15160-15531 bp Ori: ATU14530.1 Feature: domain Description: PRK10276 Location: 15205-15367 bp Feature: domain Description: PRK1 0276 Location: 1 5205-1 5367 bp Feature: gene Location: 1403407-1404672 bp Ori: ATU15796.1 Feature: domain Description: umuC Location: 1403410-1404670 bp Feature: domain Description: umuC Location: 1 40341 0-1 404670 bp Feature: gene Location: 1404674-1405093 bp Ori: ATU15797.1 Feature: domain Description: PRK10276 Location: 1404677-1405088 bp Feature: domain Description: PRK1 0276 Location: 1 404677-1 405088 bp Feature: gene Location: 1405171-1406655 bp Ori: ATU15798.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1405573-1406263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 405573-1 406263 bp Feature: gene Location: 1408137-1408715 bp Ori: ATU15799.1 Feature: domain Description: PinE Location: 1408140-1408686 bp Feature: domain Description: PinE Location: 1 4081 40-1 408686 bp Feature: gene Location: 1409524-1410465 bp Feature: gene Location: 1661687-1662952 bp Ori: ATU16041.1 Feature: domain Description: umuC Location: 1661690-1662950 bp Feature: domain Description: umuC Location: 1 661 690-1 662950 bp Feature: gene Location: 1662955-1663374 bp Ori: ATU16042.1 Feature: domain Description: PRK10276 Location: 1662958-1663369 bp Feature: domain Description: PRK1 0276 Location: 1 662958-1 663369 bp Feature: gene Location: 1663453-1664937 bp Ori: ATU16043.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1663855-1664545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 663855-1 664545 bp Feature: gene Location: 1665555-1665797 bp Ori: ATU16044.1 Feature: domain Description: DinI Location: 1665606-1665786 bp Feature: domain Description: DinI Location: 1 665606-1 665786 bp Feature: gene Location: 1665968-1667107 bp Ori: ATU16045.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1666151-1667051 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 6661 51 -1 667051 bp Feature: gene Location: 4555739-4556503 bp Ori: ATU18661.1 Feature: domain Description: FimC Location: 4555784-4556486 bp Feature: domain Description: FimC Location: 4555784-4556486 bp Feature: gene Location: 4556550-4559144 bp Ori: ATU18662.1 Feature: domain Description: FimD Location: 4556592-4559133 bp Feature: domain Description: FimD Location: 4556592-45591 33 bp Feature: gene Location: 4559141-4561222 bp Ori: ATU18663.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4559552-4559996 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4559552-4559996 bp Feature: gene Location: 4561899-4563137 bp Feature: domain Description: PRK09692 Location: 4561905-4563087 bp Feature: domain Description: PRK09692 Location: 4561 905-4563087 bp Feature: gene Location: 4563661-4564374 bp Ori: ATU18664.1 Feature: domain Description: YqgA Location: 4563667-4564369 bp Feature: domain Description: YqgA Location: 4563667-4564369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional)
YqgA (COG1811)