myRT

myRT report for GCA_002761835.1_ASM276183v1

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Seq: CP024090.1 Escherichia coli strain WG5 chromosome, complete genome (4592887 bp)
Overview 1 RT 1: 1828806-1832865 bp 2 RT 2: 1894752-1897987 bp 3 RT 3: 2328029-2332496 bp 4 RT 4: 3560775-3564476 bp 5 RT 5: 3595633-3599893 bp 6 RT 6: 3985835-3989652 bp Neighborhood of RT #1 [1828806, 1833259] DDE_Tnp_ISL3 COG4584 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [1894752, 1898052] DUF5503 PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [2328029, 2332890] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #4 [3560775, 3564476] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #5 [3595633, 3600003] PHA02517 RVT-GII GIIM PHA02517 IS285 Neighborhood of RT #6 [3985835, 3989684] InsE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1828806-1829810 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1828836-1829193 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 828836-1 8291 93 bp Feature: domain Description: COG4584 Location: 1829250-1829535 bp Feature: domain Description: COG4584 Location: 1 829250-1 829535 bp Feature: gene Location: 1829842-1830309 bp Feature: domain Description: PHA02517 Location: 1829845-1830304 bp Feature: domain Description: PHA0251 7 Location: 1 829845-1 830304 bp Feature: gene Location: 1830390-1831913 bp Ori: ATU34626.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1830663-1831395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 830663-1 831 395 bp Feature: domain Description: GIIM Note: maturase Location: 1831470-1831668 bp Feature: domain Description: GIIM Note: maturase Location: 1 831 470-1 831 668 bp Feature: gene Location: 1832207-1832638 bp Feature: gene Location: 1832571-1833259 bp Feature: domain Description: InsE Location: 1832580-1832865 bp Feature: domain Description: InsE Location: 1 832580-1 832865 bp Feature: gene Location: 1894752-1894859 bp Feature: domain Description: DUF5503 Location: 1894755-1894860 bp Feature: domain Description: DUF5503 Location: 1 894755-1 894860 bp Feature: gene Location: 1894877-1895353 bp Feature: domain Description: PHA02517 Location: 1894880-1895345 bp Feature: domain Description: PHA0251 7 Location: 1 894880-1 895345 bp Feature: gene Location: 1895434-1896957 bp Ori: ATU34677.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1895707-1896439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 895707-1 896439 bp Feature: domain Description: GIIM Note: maturase Location: 1896514-1896712 bp Feature: domain Description: GIIM Note: maturase Location: 1 89651 4-1 89671 2 bp Feature: gene Location: 1897251-1897661 bp Feature: gene Location: 1897549-1898052 bp Ori: ATU34679.1 Feature: domain Description: PHA02517 Location: 1897648-1897987 bp Feature: domain Description: PHA0251 7 Location: 1 897648-1 897987 bp Feature: gene Location: 2328029-2328891 bp Feature: gene Location: 2329473-2329940 bp Feature: domain Description: PHA02517 Location: 2329476-2329935 bp Feature: domain Description: PHA0251 7 Location: 2329476-2329935 bp Feature: gene Location: 2330021-2331544 bp Ori: ATU35102.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2330294-2331026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2330294-2331 026 bp Feature: domain Description: GIIM Note: maturase Location: 2331101-2331299 bp Feature: domain Description: GIIM Note: maturase Location: 2331 1 01 -2331 299 bp Feature: gene Location: 2331838-2332269 bp Feature: gene Location: 2332202-2332890 bp Feature: domain Description: InsE Location: 2332211-2332496 bp Feature: domain Description: InsE Location: 233221 1 -2332496 bp Feature: gene Location: 3560775-3561514 bp Feature: domain Description: InsE Location: 3560778-3561117 bp Feature: domain Description: InsE Location: 3560778-3561 1 1 7 bp Feature: gene Location: 3561507-3561878 bp Feature: gene Location: 3562172-3563695 bp Ori: ATU36203.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3562445-3563177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3562445-35631 77 bp Feature: domain Description: GIIM Note: maturase Location: 3563252-3563450 bp Feature: domain Description: GIIM Note: maturase Location: 3563252-3563450 bp Feature: gene Location: 3563785-3564258 bp Feature: domain Description: PHA02517 Location: 3563791-3564256 bp Feature: domain Description: PHA0251 7 Location: 3563791 -3564256 bp Feature: gene Location: 3564297-3564476 bp Feature: gene Location: 3595633-3596058 bp Feature: domain Description: PHA02517 Location: 3595723-3596059 bp Feature: domain Description: PHA0251 7 Location: 3595723-3596059 bp Feature: gene Location: 3595985-3596422 bp Feature: gene Location: 3596716-3598239 bp Ori: ATU36230.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3596989-3597721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3596989-3597721 bp Feature: domain Description: GIIM Note: maturase Location: 3597796-3597994 bp Feature: domain Description: GIIM Note: maturase Location: 3597796-3597994 bp Feature: gene Location: 3598320-3598807 bp Feature: domain Description: PHA02517 Location: 3598323-3598494 bp Feature: domain Description: PHA0251 7 Location: 3598323-3598494 bp Feature: gene Location: 3598705-3600003 bp Ori: ATU36231.1 Feature: domain Description: IS285 Location: 3598735-3599893 bp Feature: domain Description: IS285 Location: 3598735-3599893 bp Feature: gene Location: 3985835-3986574 bp Feature: domain Description: InsE Location: 3985838-3986177 bp Feature: domain Description: InsE Location: 3985838-39861 77 bp Feature: gene Location: 3986567-3986938 bp Feature: gene Location: 3987232-3988755 bp Ori: ATU36574.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987505-3988237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987505-3988237 bp Feature: domain Description: GIIM Note: maturase Location: 3988312-3988510 bp Feature: domain Description: GIIM Note: maturase Location: 398831 2-398851 0 bp Feature: gene Location: 3988845-3989318 bp Feature: domain Description: PHA02517 Location: 3988851-3989316 bp Feature: domain Description: PHA0251 7 Location: 3988851 -398931 6 bp Feature: gene Location: 3989358-3989684 bp Ori: ATU36575.1 Feature: domain Description: InsE Location: 3989367-3989652 bp Feature: domain Description: InsE Location: 3989367-3989652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), COG4584 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), DUF5503 (pfam17607), IS285 (COG3328)