myRT

myRT report for GCA_002763655.1_ASM276365v1

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Seq: CP024712.1 Pseudomonas syringae pv. actinidiae strain MAFF212063 chromosome, complete genome (6556999 bp)
Overview 1 RT 1: 74116-77514 bp 2 RT 2: 294944-302217 bp 3 RT 3: 641265-651363 bp 4 RT 4: 754312-759208 bp 5 RT 5: 952606-963116 bp 6 RT 6: 1086531-1090069 bp 7 RT 7: 1112528-1116880 bp 8 RT 8: 1879847-1882503 bp 9 RT 9: 2094692-2100572 bp 10 RT 10: 2487929-2503744 bp 11 RT 11: 2652464-2655624 bp 12 RT 12: 3139391-3144815 bp 13 RT 13: 3247715-3257312 bp 14 RT 14: 3648327-3654033 bp 15 RT 15: 3735225-3738891 bp 16 RT 16: 4033283-4038786 bp 17 RT 17: 4341689-4346478 bp 18 RT 18: 4387401-4393792 bp 19 RT 19: 4493631-4499659 bp 20 RT 20: 5328517-5332975 bp 21 RT 21: 5761284-5767731 bp 22 RT 22: 5825562-5833160 bp 23 RT 23: 6068660-6075808 bp 24 RT 24: 6135906-6141158 bp 25 RT 25: 6345852-6351362 bp 26 RT 26: 6426489-6432298 bp 27 RT 27: 6488220-6493560 bp Neighborhood of RT #1 [74116, 77514] FixJ RVT-GII GIIM Neighborhood of RT #2 [294944, 302219] KOG0713 RVT-GII GIIM PurR CirA Neighborhood of RT #3 [641265, 651404] DUF3999 COG5373 COG5373 RVT-GII GT35_Glycogen_Phosphorylase pro_imino_pep_1 Neighborhood of RT #4 [754312, 759480] COG3666 DDE_Tnp_1 RVT-GII Nterm_IS4 DDE_Tnp_1 Neighborhood of RT #5 [952606, 963142] PRK01254 RVT-GII Bact_transglu_N Transglut_core DUF2126 COG2308 COG2307 Neighborhood of RT #6 [1086531, 1090092] ArfA RVT-GII GIIM holA Neighborhood of RT #7 [1112528, 1116987] RVT-GII GIIM AppC Neighborhood of RT #8 [1879847, 1882503] RVT-GII Neighborhood of RT #9 [2094692, 2100640] COG3666 RVT-GII TrkG Arsenite_oxidase Neighborhood of RT #10 [2487929, 2503744] PRK12467 PRK12467 A_NRPS PRK12467 FhuE RVT-GII GIIM FhuE Neighborhood of RT #11 [2652464, 2655752] RVT-GII GIIM HTH_28 DDE_3 Neighborhood of RT #12 [3139391, 3144823] PilU RVT-GII YejF Neighborhood of RT #13 [3247715, 3257440] IucD PLP_SbnA_fam RVT-GII GIIM DNA_ligase_ZBD DNA_ligase_ZBD DNA_ligase_ZBD DNA_ligase_ZBD RVT-GII GIIM dehyd_SbnB_fam NAD_binding_9 YdhS Neighborhood of RT #14 [3648327, 3654062] RVT-GII GAF_2 GAF_2 PRK10060 Neighborhood of RT #15 [3735225, 3738891] RVT-GII GIIM Neighborhood of RT #16 [4033283, 4038797] ALDH_KGSADH RVT-GII solA Neighborhood of RT #17 [4341689, 4346504] RVT-GII PRK00153 PRK07994 Neighborhood of RT #18 [4387401, 4393797] Tar AraJ RVT-GII GIIM YliI Neighborhood of RT #19 [4493631, 4499727] Lactonase DUF5629 DUF5629 RVT-GII GIIM GguC MFS_ExuT_GudP_like Neighborhood of RT #20 [5328517, 5332983] COG3492 HopJ RVT-GII GIIM PRK10262 Neighborhood of RT #21 [5761284, 5767766] ALDH_F6_MMSDH LysR RVT-G2L4 LZ_Tnp_IS66 TnpB_IS66 Neighborhood of RT #22 [5825562, 5833216] ZntA HTH_CueR RVT-GII GIIM RIO1 SBF_like Neighborhood of RT #23 [6068660, 6075810] Amino_oxidase R-amidase_like RVT-GII GIIM PQQ_syn_pqqF pqqA Neighborhood of RT #24 [6135906, 6141175] Methyltransf_32 KOG2651 RVT-GII GIIM PRK05231 Neighborhood of RT #25 [6345852, 6351403] pyrE RVT-GII PRK00942 PMM_PGM Neighborhood of RT #26 [6426489, 6432300] TrpA RcnB RVT-GII CoxL Neighborhood of RT #27 [6488220, 6493574] MviM PRK00819 RVT-GII GIIM MhpC DOPA_dioxygen Feature: gene Location: 74116-74754 bp Ori: ATV15524.1 Feature: domain Description: FixJ Location: 74149-74743 bp Feature: domain Description: FixJ Location: 741 49-74743 bp Feature: gene Location: 74969-75244 bp Feature: gene Location: 75533-76816 bp Ori: ATV15526.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75773-76388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75773-76388 bp Feature: domain Description: GIIM Note: maturase Location: 76433-76643 bp Feature: domain Description: GIIM Note: maturase Location: 76433-76643 bp Feature: gene Location: 76913-77284 bp Feature: gene Location: 77317-77514 bp Feature: gene Location: 294944-295246 bp Feature: gene Location: 295647-296660 bp Ori: ATV15704.1 Feature: domain Description: KOG0713 Location: 295668-295857 bp Feature: domain Description: KOG071 3 Location: 295668-295857 bp Feature: gene Location: 297225-298508 bp Ori: ATV15705.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297465-298080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297465-298080 bp Feature: domain Description: GIIM Note: maturase Location: 298125-298335 bp Feature: domain Description: GIIM Note: maturase Location: 2981 25-298335 bp Feature: gene Location: 298686-299732 bp Ori: ATV15706.1 Feature: domain Description: PurR Location: 298737-299730 bp Feature: domain Description: PurR Location: 298737-299730 bp Feature: gene Location: 299952-302219 bp Ori: ATV20771.1 Feature: domain Description: CirA Location: 300084-302217 bp Feature: domain Description: CirA Location: 300084-30221 7 bp Feature: gene Location: 641265-642629 bp Ori: ATV20790.1 Feature: domain Description: DUF3999 Location: 641352-642606 bp Feature: domain Description: DUF3999 Location: 641 352-642606 bp Feature: gene Location: 642640-645453 bp Ori: ATV15991.1 Feature: domain Description: COG5373 Location: 642859-644170 bp Feature: domain Description: COG5373 Location: 642859-6441 70 bp Feature: domain Description: COG5373 Location: 644227-645400 bp Feature: domain Description: COG5373 Location: 644227-645400 bp Feature: gene Location: 646189-647471 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646429-646522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646429-646522 bp Feature: gene Location: 647703-650153 bp Ori: ATV15992.1 Feature: domain Description: GT35_Glycogen_Phosphorylase Location: 647757-650142 bp Feature: domain Description: GT35_Glycogen_Phosphorylase Location: 647757-6501 42 bp Feature: gene Location: 650433-651404 bp Ori: ATV15993.1 Gene: pip Feature: domain Description: pro_imino_pep_1 Location: 650460-651363 bp Feature: domain Description: pro_imino_pep_1 Location: 650460-651 363 bp Feature: gene Location: 754312-754434 bp Feature: gene Location: 754484-755914 bp Ori: ATV16076.1 Feature: domain Description: COG3666 Location: 754496-754973 bp Feature: domain Description: COG3666 Location: 754496-754973 bp Feature: domain Description: DDE_Tnp_1 Location: 755150-755858 bp Feature: domain Description: DDE_Tnp_1 Location: 7551 50-755858 bp Feature: gene Location: 756181-757547 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756514-757129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75651 4-7571 29 bp Feature: gene Location: 757595-757924 bp Feature: gene Location: 758125-759480 bp Feature: domain Description: Nterm_IS4 Location: 758203-758479 bp Feature: domain Description: Nterm_IS4 Location: 758203-758479 bp Feature: domain Description: DDE_Tnp_1 Location: 758530-759208 bp Feature: domain Description: DDE_Tnp_1 Location: 758530-759208 bp Feature: gene Location: 952606-954915 bp Ori: ATV16218.1 Feature: domain Description: PRK01254 Location: 952609-954766 bp Feature: domain Description: PRK01 254 Location: 952609-954766 bp Feature: gene Location: 954933-955092 bp Feature: gene Location: 955643-956925 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955883-955976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955883-955976 bp Feature: gene Location: 957281-960559 bp Ori: ATV16219.1 Feature: domain Description: Bact_transglu_N Location: 957299-957533 bp Feature: domain Description: Bact_transglu_N Location: 957299-957533 bp Feature: domain Description: Transglut_core Location: 957716-958019 bp Feature: domain Description: Transglut_core Location: 95771 6-95801 9 bp Feature: domain Description: DUF2126 Location: 958109-960551 bp Feature: domain Description: DUF21 26 Location: 9581 09-960551 bp Feature: gene Location: 960647-963142 bp Ori: ATV16220.1 Feature: domain Description: COG2308 Location: 960683-962102 bp Feature: domain Description: COG2308 Location: 960683-9621 02 bp Feature: domain Description: COG2307 Location: 962174-963116 bp Feature: domain Description: COG2307 Location: 9621 74-9631 1 6 bp Feature: gene Location: 1086531-1086686 bp Ori: ATV16321.1 Feature: domain Description: ArfA Location: 1086543-1086669 bp Feature: domain Description: ArfA Location: 1 086543-1 086669 bp Feature: gene Location: 1086702-1086944 bp Feature: gene Location: 1087392-1088675 bp Ori: ATV16323.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1087632-1088247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 087632-1 088247 bp Feature: domain Description: GIIM Note: maturase Location: 1088292-1088502 bp Feature: domain Description: GIIM Note: maturase Location: 1 088292-1 088502 bp Feature: gene Location: 1088831-1089048 bp Feature: gene Location: 1089055-1090092 bp Ori: ATV16324.1 Feature: domain Description: holA Location: 1089058-1090069 bp Feature: domain Description: holA Location: 1 089058-1 090069 bp Feature: gene Location: 1112528-1112947 bp Feature: gene Location: 1112841-1113314 bp Feature: gene Location: 1113755-1115038 bp Ori: ATV16349.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113995-1114610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 3995-1 1 1 461 0 bp Feature: domain Description: GIIM Note: maturase Location: 1114655-1114865 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 4655-1 1 1 4865 bp Feature: gene Location: 1115099-1115320 bp Feature: gene Location: 1115548-1116987 bp Ori: ATV16351.1 Feature: domain Description: AppC Location: 1115560-1116880 bp Feature: domain Description: AppC Location: 1 1 1 5560-1 1 1 6880 bp Feature: gene Location: 1879847-1879955 bp Feature: gene Location: 1880181-1880354 bp Feature: gene Location: 1880442-1881807 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1880775-1881381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 880775-1 881 381 bp Feature: gene Location: 1881809-1882127 bp Feature: gene Location: 1882138-1882503 bp Feature: gene Location: 2094692-2096121 bp Feature: domain Description: COG3666 Location: 2094704-2095181 bp Feature: domain Description: COG3666 Location: 2094704-20951 81 bp Feature: gene Location: 2096171-2096389 bp Feature: gene Location: 2096614-2097769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2096854-2097025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2096854-2097025 bp Feature: gene Location: 2098451-2099905 bp Ori: ATV17143.1 Feature: domain Description: TrkG Location: 2098469-2099903 bp Feature: domain Description: TrkG Location: 2098469-2099903 bp Feature: gene Location: 2100080-2100640 bp Ori: ATV17144.1 Feature: domain Description: Arsenite_oxidase Location: 2100092-2100572 bp Feature: domain Description: Arsenite_oxidase Location: 21 00092-21 00572 bp Feature: gene Location: 2487929-2496550 bp Ori: ATV17464.1 Feature: domain Description: PRK12467 Location: 2487932-2490764 bp Feature: domain Description: PRK1 2467 Location: 2487932-2490764 bp Feature: domain Description: PRK12467 Location: 2490779-2493866 bp Feature: domain Description: PRK1 2467 Location: 2490779-2493866 bp Feature: domain Description: A_NRPS Location: 2493950-2495390 bp Feature: domain Description: A_NRPS Location: 2493950-2495390 bp Feature: domain Description: PRK12467 Location: 2495456-2496290 bp Feature: domain Description: PRK1 2467 Location: 2495456-2496290 bp Feature: gene Location: 2496687-2499092 bp Ori: ATV17465.1 Feature: domain Description: FhuE Location: 2496978-2499090 bp Feature: domain Description: FhuE Location: 2496978-2499090 bp Feature: gene Location: 2499778-2501061 bp Ori: ATV17466.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500018-2500633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250001 8-2500633 bp Feature: domain Description: GIIM Note: maturase Location: 2500678-2500888 bp Feature: domain Description: GIIM Note: maturase Location: 2500678-2500888 bp Feature: gene Location: 2501205-2503436 bp Ori: ATV17467.1 Feature: domain Description: FhuE Location: 2501283-2503434 bp Feature: domain Description: FhuE Location: 2501 283-2503434 bp Feature: gene Location: 2503435-2503744 bp Feature: gene Location: 2652464-2652697 bp Feature: gene Location: 2652629-2652850 bp Feature: gene Location: 2652938-2654305 bp Ori: ATV20904.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2653271-2653886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2653271 -2653886 bp Feature: domain Description: GIIM Note: maturase Location: 2653943-2654171 bp Feature: domain Description: GIIM Note: maturase Location: 2653943-26541 71 bp Feature: gene Location: 2654353-2654634 bp Feature: gene Location: 2654685-2655752 bp Ori: ATV17578.1 Feature: domain Description: HTH_28 Location: 2654778-2654931 bp Feature: domain Description: HTH_28 Location: 2654778-2654931 bp Feature: domain Description: DDE_3 Location: 2655192-2655624 bp Feature: domain Description: DDE_3 Location: 26551 92-2655624 bp Feature: gene Location: 3139391-3140560 bp Ori: ATV17955.1 Feature: domain Description: PilU Location: 3139394-3140468 bp Feature: domain Description: PilU Location: 31 39394-31 40468 bp Feature: gene Location: 3140566-3140901 bp Feature: gene Location: 3141424-3142579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141664-3141835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 41 664-31 41 835 bp Feature: gene Location: 3143015-3143230 bp Feature: gene Location: 3143246-3144823 bp Ori: ATV17958.1 Feature: domain Description: YejF Location: 3143252-3144815 bp Feature: domain Description: YejF Location: 31 43252-31 4481 5 bp Feature: gene Location: 3247715-3249037 bp Ori: ATV20940.1 Feature: domain Description: IucD Location: 3247751-3249002 bp Feature: domain Description: IucD Location: 3247751 -3249002 bp Feature: gene Location: 3249034-3250113 bp Feature: domain Description: PLP_SbnA_fam Location: 3249079-3249970 bp Feature: domain Description: PLP_SbnA_fam Location: 3249079-3249970 bp Feature: gene Location: 3250773-3252056 bp Ori: ATV18047.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3251013-3251628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3251 01 3-3251 628 bp Feature: domain Description: GIIM Note: maturase Location: 3251673-3251883 bp Feature: domain Description: GIIM Note: maturase Location: 3251 673-3251 883 bp Feature: gene Location: 3252140-3252775 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252233-3252269 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252233-3252269 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252392-3252428 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252392-3252428 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252551-3252587 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252551 -3252587 bp Feature: domain Description: DNA_ligase_ZBD Location: 3252710-3252746 bp Feature: domain Description: DNA_ligase_ZBD Location: 325271 0-3252746 bp Feature: gene Location: 3253279-3254562 bp Ori: ATV18048.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3253519-3254134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325351 9-32541 34 bp Feature: domain Description: GIIM Note: maturase Location: 3254179-3254389 bp Feature: domain Description: GIIM Note: maturase Location: 32541 79-3254389 bp Feature: gene Location: 3254652-3255692 bp Ori: ATV18049.1 Feature: domain Description: dehyd_SbnB_fam Location: 3254706-3255669 bp Feature: domain Description: dehyd_SbnB_fam Location: 3254706-3255669 bp Feature: gene Location: 3255698-3257440 bp Ori: ATV20941.1 Feature: domain Description: NAD_binding_9 Location: 3255719-3256238 bp Feature: domain Description: NAD_binding_9 Location: 325571 9-3256238 bp Feature: domain Description: YdhS Location: 3257066-3257312 bp Feature: domain Description: YdhS Location: 3257066-325731 2 bp Feature: gene Location: 3648327-3648506 bp Feature: gene Location: 3648446-3648775 bp Feature: gene Location: 3648823-3650186 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649156-3649768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36491 56-3649768 bp Feature: gene Location: 3650869-3651423 bp Feature: gene Location: 3651603-3654062 bp Ori: ATV20963.1 Feature: domain Description: GAF_2 Location: 3651645-3652083 bp Feature: domain Description: GAF_2 Location: 3651 645-3652083 bp Feature: domain Description: GAF_2 Location: 3652248-3652668 bp Feature: domain Description: GAF_2 Location: 3652248-3652668 bp Feature: domain Description: PRK10060 Location: 3652752-3654033 bp Feature: domain Description: PRK1 0060 Location: 3652752-3654033 bp Feature: gene Location: 3735225-3735692 bp Feature: gene Location: 3735692-3736432 bp Feature: gene Location: 3736567-3737934 bp Ori: ATV20967.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736900-3737515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736900-373751 5 bp Feature: domain Description: GIIM Note: maturase Location: 3737572-3737800 bp Feature: domain Description: GIIM Note: maturase Location: 3737572-3737800 bp Feature: gene Location: 3737982-3738311 bp Feature: gene Location: 3738327-3738891 bp Feature: gene Location: 4033283-4034866 bp Ori: ATV18630.1 Feature: domain Description: ALDH_KGSADH Location: 4033421-4034768 bp Feature: domain Description: ALDH_KGSADH Location: 4033421 -4034768 bp Feature: gene Location: 4035370-4035474 bp Feature: gene Location: 4035658-4037024 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4035991-4036606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4035991 -4036606 bp Feature: gene Location: 4037072-4037401 bp Feature: gene Location: 4037622-4038797 bp Feature: domain Description: solA Location: 4037631-4038786 bp Feature: domain Description: solA Location: 4037631 -4038786 bp Feature: gene Location: 4341689-4341772 bp Feature: gene Location: 4341832-4342150 bp Feature: gene Location: 4342152-4343518 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4342485-4343100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4342485-43431 00 bp Feature: gene Location: 4343879-4344205 bp Ori: ATV18881.1 Feature: domain Description: PRK00153 Location: 4343885-4344194 bp Feature: domain Description: PRK001 53 Location: 4343885-43441 94 bp Feature: gene Location: 4344267-4346504 bp Ori: ATV18882.1 Feature: domain Description: PRK07994 Location: 4344270-4346478 bp Feature: domain Description: PRK07994 Location: 4344270-4346478 bp Feature: gene Location: 4387401-4389041 bp Ori: ATV18914.1 Feature: domain Description: Tar Location: 4387863-4389033 bp Feature: domain Description: Tar Location: 4387863-4389033 bp Feature: gene Location: 4389055-4390254 bp Ori: ATV18915.1 Feature: domain Description: AraJ Location: 4389094-4390237 bp Feature: domain Description: AraJ Location: 4389094-4390237 bp Feature: gene Location: 4390611-4391894 bp Ori: ATV18916.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4390851-4391466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4390851 -4391 466 bp Feature: domain Description: GIIM Note: maturase Location: 4391511-4391721 bp Feature: domain Description: GIIM Note: maturase Location: 4391 51 1 -4391 721 bp Feature: gene Location: 4392176-4392487 bp Feature: gene Location: 4392505-4393797 bp Ori: ATV18918.1 Feature: domain Description: YliI Location: 4392526-4393792 bp Feature: domain Description: YliI Location: 4392526-4393792 bp Feature: gene Location: 4493631-4494803 bp Ori: ATV18988.1 Feature: domain Description: Lactonase Location: 4493721-4494789 bp Feature: domain Description: Lactonase Location: 4493721 -4494789 bp Feature: gene Location: 4494884-4495282 bp Ori: ATV18989.1 Feature: domain Description: DUF5629 Location: 4495019-4495100 bp Feature: domain Description: DUF5629 Location: 449501 9-44951 00 bp Feature: domain Description: DUF5629 Location: 4495100-4495247 bp Feature: domain Description: DUF5629 Location: 44951 00-4495247 bp Feature: gene Location: 4495394-4496677 bp Ori: ATV18990.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4495634-4496249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4495634-4496249 bp Feature: domain Description: GIIM Note: maturase Location: 4496294-4496504 bp Feature: domain Description: GIIM Note: maturase Location: 4496294-4496504 bp Feature: gene Location: 4497348-4498340 bp Ori: ATV18991.1 Feature: domain Description: GguC Location: 4497351-4498305 bp Feature: domain Description: GguC Location: 4497351 -4498305 bp Feature: gene Location: 4498420-4499727 bp Ori: ATV18992.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 4498462-4499659 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 4498462-4499659 bp Feature: gene Location: 5328517-5328813 bp Ori: ATV19687.1 Feature: domain Description: COG3492 Location: 5328520-5328805 bp Feature: domain Description: COG3492 Location: 5328520-5328805 bp Feature: gene Location: 5328806-5329147 bp Ori: ATV19688.1 Feature: domain Description: HopJ Location: 5328824-5329133 bp Feature: domain Description: HopJ Location: 5328824-53291 33 bp Feature: gene Location: 5330067-5331350 bp Ori: ATV19689.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5330307-5330922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5330307-5330922 bp Feature: domain Description: GIIM Note: maturase Location: 5330967-5331177 bp Feature: domain Description: GIIM Note: maturase Location: 5330967-5331 1 77 bp Feature: gene Location: 5331798-5331983 bp Feature: gene Location: 5332021-5332983 bp Ori: ATV19691.1 Gene: trxB Feature: domain Description: PRK10262 Location: 5332024-5332975 bp Feature: domain Description: PRK1 0262 Location: 5332024-5332975 bp Feature: gene Location: 5761284-5762810 bp Ori: ATV20054.1 Gene: mmsA Feature: domain Description: ALDH_F6_MMSDH Location: 5761329-5762757 bp Feature: domain Description: ALDH_F6_MMSDH Location: 5761 329-5762757 bp Feature: gene Location: 5762968-5763912 bp Ori: ATV20055.1 Feature: domain Description: LysR Location: 5763004-5763856 bp Feature: domain Description: LysR Location: 5763004-5763856 bp Feature: gene Location: 5764833-5765819 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 5765052-5765637 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 5765052-5765637 bp Feature: gene Location: 5765862-5767392 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5765970-5766168 bp Feature: domain Description: LZ_Tnp_IS66 Location: 5765970-57661 68 bp Feature: gene Location: 5767410-5767766 bp Ori: ATV21072.1 Feature: domain Description: TnpB_IS66 Location: 5767437-5767731 bp Feature: domain Description: TnpB_IS66 Location: 5767437-5767731 bp Feature: gene Location: 5825562-5827760 bp Ori: ATV20090.1 Feature: domain Description: ZntA Location: 5825583-5827734 bp Feature: domain Description: ZntA Location: 5825583-5827734 bp Feature: gene Location: 5827757-5828158 bp Ori: ATV20091.1 Gene: cueR Feature: domain Description: HTH_CueR Location: 5827760-5828138 bp Feature: domain Description: HTH_CueR Location: 5827760-58281 38 bp Feature: gene Location: 5828727-5830010 bp Ori: ATV20092.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5828967-5829582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5828967-5829582 bp Feature: domain Description: GIIM Note: maturase Location: 5829627-5829837 bp Feature: domain Description: GIIM Note: maturase Location: 5829627-5829837 bp Feature: gene Location: 5830836-5831732 bp Ori: ATV20093.1 Feature: domain Description: RIO1 Location: 5830842-5831664 bp Feature: domain Description: RIO1 Location: 5830842-5831 664 bp Feature: gene Location: 5832188-5833216 bp Ori: ATV21078.1 Feature: domain Description: SBF_like Location: 5832227-5833160 bp Feature: domain Description: SBF_like Location: 5832227-58331 60 bp Feature: gene Location: 6068660-6070339 bp Ori: ATV20326.1 Feature: domain Description: Amino_oxidase Location: 6068822-6070250 bp Feature: domain Description: Amino_oxidase Location: 6068822-6070250 bp Feature: gene Location: 6070357-6071163 bp Ori: ATV20327.1 Feature: domain Description: R-amidase_like Location: 6070363-6071131 bp Feature: domain Description: R-amidase_like Location: 6070363-6071 1 31 bp Feature: gene Location: 6071336-6072619 bp Ori: ATV20328.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071576-6072191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071 576-60721 91 bp Feature: domain Description: GIIM Note: maturase Location: 6072236-6072446 bp Feature: domain Description: GIIM Note: maturase Location: 6072236-6072446 bp Feature: gene Location: 6073261-6075600 bp Ori: ATV20329.1 Gene: pqqF Feature: domain Description: PQQ_syn_pqqF Location: 6073303-6075304 bp Feature: domain Description: PQQ_syn_pqqF Location: 6073303-6075304 bp Feature: gene Location: 6075736-6075810 bp Ori: ATV21091.1 Gene: pqqA Feature: domain Description: pqqA Location: 6075745-6075808 bp Feature: domain Description: pqqA Location: 6075745-6075808 bp Feature: gene Location: 6135906-6137177 bp Ori: ATV20389.1 Feature: domain Description: Methyltransf_32 Location: 6136296-6136662 bp Feature: domain Description: Methyltransf_32 Location: 61 36296-61 36662 bp Feature: domain Description: KOG2651 Location: 6136995-6137172 bp Feature: domain Description: KOG2651 Location: 61 36995-61 371 72 bp Feature: gene Location: 6137473-6137787 bp Feature: gene Location: 6138237-6139520 bp Ori: ATV20391.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6138477-6139092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 38477-61 39092 bp Feature: domain Description: GIIM Note: maturase Location: 6139137-6139347 bp Feature: domain Description: GIIM Note: maturase Location: 61 391 37-61 39347 bp Feature: gene Location: 6140035-6140127 bp Feature: gene Location: 6140225-6141175 bp Ori: ATV20392.1 Feature: domain Description: PRK05231 Location: 6140228-6141158 bp Feature: domain Description: PRK05231 Location: 61 40228-61 41 1 58 bp Feature: gene Location: 6345852-6346493 bp Ori: ATV20577.1 Feature: domain Description: pyrE Location: 6345855-6346488 bp Feature: domain Description: pyrE Location: 6345855-6346488 bp Feature: gene Location: 6346504-6347136 bp Feature: gene Location: 6347774-6348929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6348014-6348185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 634801 4-63481 85 bp Feature: gene Location: 6349072-6349977 bp Ori: ATV20579.1 Gene: argB Feature: domain Description: PRK00942 Location: 6349096-6349963 bp Feature: domain Description: PRK00942 Location: 6349096-6349963 bp Feature: gene Location: 6350006-6351403 bp Ori: ATV21108.1 Feature: domain Description: PMM_PGM Location: 6350051-6351362 bp Feature: domain Description: PMM_PGM Location: 6350051 -6351 362 bp Feature: gene Location: 6426489-6427301 bp Ori: ATV20650.1 Feature: domain Description: TrpA Location: 6426492-6427284 bp Feature: domain Description: TrpA Location: 6426492-6427284 bp Feature: gene Location: 6427428-6427946 bp Ori: ATV20651.1 Feature: domain Description: RcnB Location: 6427785-6427920 bp Feature: domain Description: RcnB Location: 6427785-6427920 bp Feature: gene Location: 6428096-6429251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6428336-6428507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6428336-6428507 bp Feature: gene Location: 6429791-6430027 bp Feature: gene Location: 6430093-6432300 bp Ori: ATV20653.1 Feature: domain Description: CoxL Location: 6430114-6432298 bp Feature: domain Description: CoxL Location: 64301 1 4-6432298 bp Feature: gene Location: 6488220-6489146 bp Ori: ATV20700.1 Feature: domain Description: MviM Location: 6488223-6489066 bp Feature: domain Description: MviM Location: 6488223-6489066 bp Feature: gene Location: 6489318-6489881 bp Ori: ATV21123.1 Feature: domain Description: PRK00819 Location: 6489324-6489861 bp Feature: domain Description: PRK0081 9 Location: 6489324-6489861 bp Feature: gene Location: 6490363-6491646 bp Ori: ATV20701.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6490603-6491218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6490603-6491 21 8 bp Feature: domain Description: GIIM Note: maturase Location: 6491263-6491473 bp Feature: domain Description: GIIM Note: maturase Location: 6491 263-6491 473 bp Feature: gene Location: 6492361-6493173 bp Ori: ATV20702.1 Feature: domain Description: MhpC Location: 6492379-6493165 bp Feature: domain Description: MhpC Location: 6492379-64931 65 bp Feature: gene Location: 6493386-6493574 bp Feature: domain Description: DOPA_dioxygen Location: 6493392-6493560 bp Feature: domain Description: DOPA_dioxygen Location: 6493392-6493560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FixJ (COG4566), RVT-GII, GIIM (pfam08388), KOG0713 (KOG0713, Molecular chaperone (DnaJ superfamily) ), PurR (COG1609), CirA (COG1629), DUF3999 (pfam13163), COG5373 (Uncharacterized membrane protein ), GT35_Glycogen_Phosphorylase (cd04300), pro_imino_pep_1 (TIGR01249)
COG3666 (Transposase ), DDE_Tnp_1 (pfam01609), Nterm_IS4 (pfam13006), PRK01254 (YgiQ family radical SAM protein), Bact_transglu_N (pfam08379), Transglut_core (pfam01841), DUF2126 (pfam09899), COG2308 (Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily ), COG2307 (Uncharacterized conserved protein, Alpha-E superfamily ), ArfA (COG3036)
holA (TIGR01128), AppC (COG1271), TrkG (COG0168), Arsenite_oxidase, PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930), FhuE (COG4773), HTH_28 (pfam13518), DDE_3 (pfam13358), PilU (COG5008)
YejF (COG4172), IucD (COG3486), PLP_SbnA_fam (TIGR03945), DNA_ligase_ZBD (pfam03119), dehyd_SbnB_fam (TIGR03944), NAD_binding_9 (pfam13454), YdhS (COG4529), GAF_2 (pfam13185), PRK10060 (cyclic di-GMP phosphodiesterase), ALDH_KGSADH (cd07129)
solA (PRK11259), PRK00153 (YbaB/EbfC family nucleoid-associated protein), PRK07994 (DNA polymerase III subunits gamma and tau; Validated), Tar (COG0840), AraJ (COG2814), YliI (COG2133), Lactonase (pfam10282), DUF5629 (pfam18629), GguC (COG3802), MFS_ExuT_GudP_like (cd17319)
COG3492 (Uncharacterized protein, DUF1244 family ), HopJ (pfam08888), PRK10262 (thioredoxin reductase; Provisional), ALDH_F6_MMSDH (cd07085), LysR (COG0583), RVT-G2L4, LZ_Tnp_IS66 (pfam13007), TnpB_IS66 (pfam05717), ZntA (COG2217), HTH_CueR (cd01108)
RIO1 (pfam01163), SBF_like (pfam13593), Amino_oxidase (pfam01593), R-amidase_like (cd07576), PQQ_syn_pqqF (TIGR02110), pqqA (PRK00284), Methyltransf_32 (pfam13679), KOG2651 (KOG2651, rRNA adenine N-6-methyltransferase ), PRK05231 (homoserine kinase; Provisional), pyrE (TIGR00336)
PRK00942 (acetylglutamate kinase; Provisional), PMM_PGM (cd03089), TrpA (COG0159), RcnB (pfam11776), CoxL (COG1529), MviM (COG0673), PRK00819 (RNA 2'-phosphotransferase; Reviewed), MhpC (COG0596), DOPA_dioxygen (pfam08883)