myRT

myRT report for GCA_002763745.1_ASM276374v1

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Seq: CP024723.1 Prevotella intermedia strain KCOM 2837 chromosome 1, complete sequence (2064201 bp)
Overview 1 RT 1: 136831-140823 bp Neighborhood of RT #1 [136831, 140828] Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N TraO Feature: gene Location: 136831-137190 bp Ori: ATV25385.1 Feature: domain Description: Bac_Flav_CT_N Location: 136834-137170 bp Feature: domain Description: Bac_Flav_CT_N Location: 1 36834-1 371 70 bp Feature: gene Location: 137212-137700 bp Feature: gene Location: 137734-139545 bp Ori: ATV25386.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137998-138820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37998-1 38820 bp Feature: domain Description: Intron_maturas2 Location: 138892-139189 bp Feature: domain Description: Intron_maturas2 Location: 1 38892-1 391 89 bp Feature: gene Location: 139529-140242 bp Ori: ATV25387.1 Gene: traN Feature: domain Description: Bac_Flav_CT_N Location: 139658-140219 bp Feature: domain Description: Bac_Flav_CT_N Location: 1 39658-1 4021 9 bp Feature: gene Location: 140244-140828 bp Ori: ATV25388.1 Feature: domain Description: TraO Location: 140322-140823 bp Feature: domain Description: TraO Location: 1 40322-1 40823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348), TraO (pfam10626)

Seq: CP024724.1 Prevotella intermedia strain KCOM 2837 chromosome 2, complete sequence (825849 bp)
Overview 1 RT 1: 126063-129219 bp 2 RT 2: 323737-326943 bp Neighborhood of RT #1 [126063, 129260] RVT-AbiP2 lyz_endolysin_autolysin DUF3872 Neighborhood of RT #2 [323737, 326943] DUF3872 lyz_endolysin_autolysin RVT-AbiP2 Feature: gene Location: 126063-126301 bp Feature: gene Location: 126320-126535 bp Feature: gene Location: 126662-128130 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 127043-127301 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12 7043-12 7301 bp Feature: gene Location: 128286-128790 bp Feature: domain Description: lyz_endolysin_autolysin Location: 128409-128583 bp Feature: domain Description: lyz_endolysin_autolysin Location: 12 8409-12 8583 bp Feature: gene Location: 128802-129260 bp Ori: ATV27095.1 Feature: domain Description: DUF3872 Location: 128826-129219 bp Feature: domain Description: DUF3872 Location: 12 882 6-12 92 19 bp Feature: gene Location: 323737-324195 bp Ori: ATV27244.1 Feature: domain Description: DUF3872 Location: 323761-324154 bp Feature: domain Description: DUF3872 Location: 32 3761-32 4154 bp Feature: gene Location: 324207-324713 bp Ori: ATV27245.1 Feature: domain Description: lyz_endolysin_autolysin Location: 324330-324702 bp Feature: domain Description: lyz_endolysin_autolysin Location: 32 4330-32 4702 bp Feature: gene Location: 324819-326342 bp Ori: ATV27246.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 325248-325704 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 32 52 48-32 5704 bp Feature: gene Location: 326469-326684 bp Feature: gene Location: 326689-326943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, lyz_endolysin_autolysin (cd00737), DUF3872 (pfam12988)