myRT

myRT report for GCA_002763785.1_ASM276378v1

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Seq: CP024725.1 Prevotella intermedia strain KCOM 2838 chromosome 1, complete sequence (2092617 bp)
Overview 1 RT 1: 888468-892445 bp 2 RT 2: 1819695-1823719 bp Neighborhood of RT #1 [888468, 892465] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Neighborhood of RT #2 [1819695, 1823724] Bac_Flav_CT_N RVT-GII Intron_maturas2 DUF4138 TraO Feature: gene Location: 888468-889052 bp Ori: ATV28376.1 Feature: domain Description: TraO Location: 888546-889047 bp Feature: domain Description: TraO Location: 888546-889047 bp Feature: gene Location: 889054-889767 bp Ori: ATV28377.1 Gene: traN Feature: domain Description: Bac_Flav_CT_N Location: 889183-889744 bp Feature: domain Description: Bac_Flav_CT_N Location: 8891 83-889744 bp Feature: gene Location: 889751-891562 bp Ori: ATV28378.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890015-890837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89001 5-890837 bp Feature: domain Description: Intron_maturas2 Location: 890909-891206 bp Feature: domain Description: Intron_maturas2 Location: 890909-891 206 bp Feature: gene Location: 891596-892084 bp Feature: gene Location: 892106-892465 bp Ori: ATV28379.1 Feature: domain Description: Bac_Flav_CT_N Location: 892109-892445 bp Feature: domain Description: Bac_Flav_CT_N Location: 8921 09-892445 bp Feature: gene Location: 1819695-1820063 bp Feature: domain Description: Bac_Flav_CT_N Location: 1819698-1820061 bp Feature: domain Description: Bac_Flav_CT_N Location: 1 81 9698-1 820061 bp Feature: gene Location: 1820106-1820594 bp Feature: gene Location: 1820628-1822439 bp Ori: ATV29057.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1820892-1821714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 820892-1 821 71 4 bp Feature: domain Description: Intron_maturas2 Location: 1821786-1822083 bp Feature: domain Description: Intron_maturas2 Location: 1 821 786-1 822083 bp Feature: gene Location: 1822423-1823137 bp Gene: traN Feature: domain Description: DUF4138 Location: 1822549-1823056 bp Feature: domain Description: DUF41 38 Location: 1 822549-1 823056 bp Feature: gene Location: 1823131-1823724 bp Ori: ATV29058.1 Feature: domain Description: TraO Location: 1823224-1823719 bp Feature: domain Description: TraO Location: 1 823224-1 82371 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraO (pfam10626), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348), DUF4138 (pfam13595)

Seq: CP024726.1 Prevotella intermedia strain KCOM 2838 chromosome 2, complete sequence (683216 bp)
Overview 1 RT 1: 12532-19908 bp 2 RT 2: 486247-490271 bp Neighborhood of RT #1 [12532, 19985] DUF3127 SDR_c6 RVT-UG8 RVT-UG3 Endonuclease_NS Neighborhood of RT #2 [486247, 490276] Bac_Flav_CT_N RVT-GII Intron_maturas2 DUF4138 TraO Feature: gene Location: 12532-12921 bp Ori: ATV29432.1 Feature: domain Description: DUF3127 Location: 12538-12787 bp Feature: domain Description: DUF312 7 Location: 12 538-12 787 bp Feature: gene Location: 13123-13851 bp Ori: ATV29433.1 Feature: domain Description: SDR_c6 Location: 13135-13837 bp Feature: domain Description: SDR_c6 Location: 13135-13837 bp Feature: gene Location: 14550-16466 bp Ori: ATV29434.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 15051-15495 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 15051-15495 bp Feature: gene Location: 16463-17683 bp Ori: ATV29435.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 16751-17249 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 16751-172 49 bp Feature: gene Location: 17715-17918 bp Feature: gene Location: 18918-19985 bp Ori: ATV29437.1 Feature: domain Description: Endonuclease_NS Location: 19284-19908 bp Feature: domain Description: Endonuclease_NS Location: 192 84-19908 bp Feature: gene Location: 486247-486615 bp Feature: domain Description: Bac_Flav_CT_N Location: 486250-486613 bp Feature: domain Description: Bac_Flav_CT_N Location: 4862 50-486613 bp Feature: gene Location: 486658-487146 bp Feature: gene Location: 487180-488991 bp Ori: ATV29771.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487444-488266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487444-4882 66 bp Feature: domain Description: Intron_maturas2 Location: 488338-488635 bp Feature: domain Description: Intron_maturas2 Location: 488338-488635 bp Feature: gene Location: 488975-489689 bp Gene: traN Feature: domain Description: DUF4138 Location: 489101-489608 bp Feature: domain Description: DUF4138 Location: 489101-489608 bp Feature: gene Location: 489683-490276 bp Ori: ATV29772.1 Feature: domain Description: TraO Location: 489776-490271 bp Feature: domain Description: TraO Location: 489776-4902 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3127 (pfam11325), SDR_c6 (cd05350), RVT-UG8, RVT-UG3, Endonuclease_NS (smart00892), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348), DUF4138 (pfam13595), TraO (pfam10626)