myRT

myRT report for GCA_002796585.1_ASM279658v1

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Seq: CP024887.1 Escherichia coli strain AR_0017 plasmid unitig_1_pilon, complete sequence (102544 bp)
Overview 1 RT 1: 74324-79558 bp Neighborhood of RT #1 [74324, 79596] autotrans_barl PHA02517 RVT-GII GIIM RVT-GII GIIM PHA02517 InsE Feature: gene Location: 74324-74893 bp Ori: ATY22284.1 Feature: domain Description: autotrans_barl Location: 74405-74840 bp Feature: domain Description: autotrans_barl Location: 74405-74840 bp Feature: gene Location: 74896-75369 bp Feature: domain Description: PHA02517 Location: 74902-75367 bp Feature: domain Description: PHA0251 7 Location: 74902-75367 bp Feature: gene Location: 75459-76982 bp Ori: ATY22256.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75732-76464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75732-76464 bp Feature: domain Description: GIIM Note: maturase Location: 76539-76737 bp Feature: domain Description: GIIM Note: maturase Location: 76539-76737 bp Feature: gene Location: 77365-78690 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77440-78172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77440-781 72 bp Feature: domain Description: GIIM Note: maturase Location: 78247-78445 bp Feature: domain Description: GIIM Note: maturase Location: 78247-78445 bp Feature: gene Location: 78780-79163 bp Feature: domain Description: PHA02517 Location: 78786-79119 bp Feature: domain Description: PHA0251 7 Location: 78786-791 1 9 bp Feature: gene Location: 79192-79596 bp Ori: ATY22257.1 Feature: domain Description: InsE Location: 79222-79558 bp Feature: domain Description: InsE Location: 79222-79558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: CP024886.1 Escherichia coli strain AR_0017 chromosome, complete genome (5036925 bp)
Overview 1 RT 1: 3936690-3940716 bp 2 RT 2: 4181175-4185251 bp 3 RT 3: 4191502-4196102 bp Neighborhood of RT #1 [3936690, 3940715] EmrE PHA02517 RVT-GII GIIM InsE PHA02517 Neighborhood of RT #2 [4181175, 4185251] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4191502, 4196107] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 3936690-3937019 bp Ori: ATY20972.1 Feature: domain Description: EmrE Location: 3936708-3937011 bp Feature: domain Description: EmrE Location: 3936708-3937011 bp Feature: gene Location: 3937243-3937716 bp Feature: domain Description: PHA02517 Location: 3937249-3937714 bp Feature: domain Description: PHA02 517 Location: 39372 49-3937714 bp Feature: gene Location: 3937806-3939329 bp Ori: ATY20973.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3938079-3938811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3938079-3938811 bp Feature: domain Description: GIIM Note: maturase Location: 3938886-3939084 bp Feature: domain Description: GIIM Note: maturase Location: 3938886-3939084 bp Feature: gene Location: 3939623-3939994 bp Feature: gene Location: 3939987-3940715 bp Feature: domain Description: InsE Location: 3939990-3940329 bp Feature: domain Description: InsE Location: 3939990-394032 9 bp Feature: domain Description: PHA02517 Location: 3940449-3940716 bp Feature: domain Description: PHA02 517 Location: 3940449-3940716 bp Feature: gene Location: 4181175-4181600 bp Feature: domain Description: PHA02517 Location: 4181265-4181601 bp Feature: domain Description: PHA02 517 Location: 41812 65-4181601 bp Feature: gene Location: 4181533-4181964 bp Feature: gene Location: 4182258-4183781 bp Ori: ATY21199.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4182531-4183263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4182 531-41832 63 bp Feature: domain Description: GIIM Note: maturase Location: 4183338-4183536 bp Feature: domain Description: GIIM Note: maturase Location: 4183338-4183536 bp Feature: gene Location: 4183862-4184350 bp Feature: domain Description: PHA02517 Location: 4183865-4184339 bp Feature: domain Description: PHA02 517 Location: 4183865-4184339 bp Feature: gene Location: 4184384-4185251 bp Feature: gene Location: 4191502-4191846 bp Feature: gene Location: 4192684-4192905 bp Feature: gene Location: 4193291-4193725 bp Ori: ATY21205.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4193483-4193699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4193483-4193699 bp Feature: gene Location: 4193743-4194549 bp Ori: ATY22135.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4193746-4194109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4193746-4194109 bp Feature: domain Description: GIIM Note: maturase Location: 4194157-4194382 bp Feature: domain Description: GIIM Note: maturase Location: 4194157-4194382 bp Feature: gene Location: 4194625-4194948 bp Feature: gene Location: 4195076-4196107 bp Ori: ATY21206.1 Feature: domain Description: LacI Location: 4195118-4195253 bp Feature: domain Description: LacI Location: 4195118-41952 53 bp Feature: domain Description: PBP1_GntR Location: 4195292-4196102 bp Feature: domain Description: PBP1_GntR Location: 41952 92 -4196102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EmrE (pfam13536), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), LacI (pfam00356), PBP1_GntR (cd01575)