myRT

myRT report for GCA_002803805.2_ASM280380v2

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Seq: CP024976.1 Escherichia coli strain CV839-15 plasmid pCV839-15-p2, complete sequence (195578 bp)
Overview 1 RT 1: 141867-144381 bp 2 RT 2: 185112-187836 bp Neighborhood of RT #1 [141867, 144381] RVT-GII GIIM PHA02517 Neighborhood of RT #2 [185112, 187841] DDE_Tnp_IS1 RVT-GII Intron_maturas2 HNHc PRK13732 PRK13704 Feature: gene Location: 141867-141980 bp Feature: gene Location: 142016-142138 bp Feature: gene Location: 142162-143685 bp Ori: ATZ30220.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142435-143167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42435-1 431 67 bp Feature: domain Description: GIIM Note: maturase Location: 143242-143440 bp Feature: domain Description: GIIM Note: maturase Location: 1 43242-1 43440 bp Feature: gene Location: 143808-144242 bp Ori: ATZ30221.1 Feature: domain Description: PHA02517 Location: 143811-144234 bp Feature: domain Description: PHA0251 7 Location: 1 4381 1 -1 44234 bp Feature: gene Location: 144235-144381 bp Feature: gene Location: 185112-185324 bp Feature: gene Location: 185335-185838 bp Ori: ATZ30284.1 Gene: insB Feature: domain Description: DDE_Tnp_IS1 Location: 185446-185836 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 85446-1 85836 bp Feature: gene Location: 185890-186873 bp Ori: ATZ30285.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185896-186109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 85896-1 861 09 bp Feature: domain Description: Intron_maturas2 Location: 186184-186442 bp Feature: domain Description: Intron_maturas2 Location: 1 861 84-1 86442 bp Feature: domain Description: HNHc Note: nucleases Location: 186616-186778 bp Feature: domain Description: HNHc Note: nucleases Location: 1 8661 6-1 86778 bp Feature: gene Location: 187063-187188 bp Ori: ATZ30286.1 Gene: ssb Feature: domain Description: PRK13732 Location: 187066-187186 bp Feature: domain Description: PRK1 3732 Location: 1 87066-1 871 86 bp Feature: gene Location: 187308-187841 bp Ori: ATZ30287.1 Feature: domain Description: PRK13704 Location: 187311-187836 bp Feature: domain Description: PRK1 3704 Location: 1 8731 1 -1 87836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS1 (pfam03400), Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), PRK13704 (plasmid SOS inhibition protein A; Provisional)

Seq: CP024978.1 Escherichia coli strain CV839-15 chromosome, complete genome (4917635 bp)
Overview 1 RT 1: 1681969-1686574 bp Neighborhood of RT #1 [1681969, 1686574] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 1681969-1683000 bp Ori: ATZ32086.1 Feature: domain Description: LacI Location: 1682011-1682146 bp Feature: domain Description: LacI Location: 1682 011-1682 146 bp Feature: domain Description: PBP1_GntR Location: 1682185-1682995 bp Feature: domain Description: PBP1_GntR Location: 1682 185-1682 995 bp Feature: gene Location: 1683522-1683635 bp Feature: gene Location: 1683725-1684333 bp Ori: ATZ32088.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1683728-1684091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168372 8-1684091 bp Feature: domain Description: GIIM Note: maturase Location: 1684139-1684331 bp Feature: domain Description: GIIM Note: maturase Location: 1684139-1684331 bp Feature: gene Location: 1684351-1684785 bp Ori: ATZ32089.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1684543-1684759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1684543-1684759 bp Feature: gene Location: 1685694-1686020 bp Feature: gene Location: 1686230-1686574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)