myRT

myRT report for GCA_002811335.4_ASM281133v4

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Seq: CP025966.2 Klebsiella pneumoniae strain WCHKP34 plasmid pQnrB_LL34, complete sequence (130691 bp)
Overview 1 RT 1: 124808-129010 bp Neighborhood of RT #1 [124808, 129027] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 124808-125479 bp Ori: AUT25658.1 Feature: domain Description: Plasmid_stab_B Location: 124823-125030 bp Feature: domain Description: Plasmid_stab_B Location: 1 24823-1 25030 bp Feature: domain Description: Plasmid_stab_B Location: 125135-125342 bp Feature: domain Description: Plasmid_stab_B Location: 1 251 35-1 25342 bp Feature: gene Location: 125482-126453 bp Ori: AUT25659.1 Feature: domain Description: StbA Location: 125485-126430 bp Feature: domain Description: StbA Location: 1 25485-1 26430 bp Feature: gene Location: 126702-128186 bp Ori: AUT25660.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127104-127794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 271 04-1 27794 bp Feature: gene Location: 128186-128437 bp Feature: gene Location: 128596-129027 bp Ori: AUT25662.1 Feature: domain Description: PRK10276 Location: 128647-129010 bp Feature: domain Description: PRK1 0276 Location: 1 28647-1 2901 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP025963.2 Klebsiella pneumoniae strain WCHKP34 chromosome, complete genome (5291863 bp)
Overview 1 RT 1: 661604-664664 bp 2 RT 2: 2952776-2957659 bp Neighborhood of RT #1 [661604, 664664] DinI HTH_XRE RVT-Retrons Neighborhood of RT #2 [2952776, 2957661] PRK15110 PRK09951 RVT-UG11 umuC Feature: gene Location: 661604-662044 bp Ori: AUT20737.1 Feature: domain Description: DinI Location: 661859-662042 bp Feature: domain Description: DinI Location: 661859-662 042 bp Feature: gene Location: 662665-662973 bp Ori: AUT20738.1 Feature: domain Description: HTH_XRE Location: 662677-662842 bp Feature: domain Description: HTH_XRE Location: 662 677-662 842 bp Feature: gene Location: 662951-663901 bp Ori: AUT20739.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 663131-663674 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 663131-663674 bp Feature: gene Location: 664040-664471 bp Feature: gene Location: 664470-664664 bp Feature: gene Location: 2952776-2953741 bp Ori: AUT22843.1 Feature: domain Description: PRK15110 Location: 2952779-2953739 bp Feature: domain Description: PRK15110 Location: 2 952 779-2 953739 bp Feature: gene Location: 2953946-2954614 bp Ori: AUT22844.1 Feature: domain Description: PRK09951 Location: 2953949-2954612 bp Feature: domain Description: PRK09951 Location: 2 953949-2 954612 bp Feature: gene Location: 2954815-2955444 bp Ori: AUT25056.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2954818-2955265 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 954818-2 9552 65 bp Feature: gene Location: 2955983-2956240 bp Feature: gene Location: 2956396-2957661 bp Ori: AUT22846.1 Feature: domain Description: umuC Location: 2956399-2957659 bp Feature: domain Description: umuC Location: 2 956399-2 957659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons, PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)