myRT

myRT report for GCA_002812385.1_ASM281238v1

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Seq: CP025008.1 Klebsiella pneumoniae strain AUSMDU00008119 chromosome, complete genome (5449340 bp)
Overview 1 RT 1: 1809917-1814789 bp 2 RT 2: 3108376-3112514 bp 3 RT 3: 3288740-3292839 bp 4 RT 4: 3631088-3635926 bp 5 RT 5: 4074500-4077280 bp Neighborhood of RT #1 [1809917, 1814803] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3108376, 3112514] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3288740, 3292850] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3631088, 3635976] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #5 [4074500, 4077280] PRK10276 PRK10276 RVT-GII Feature: gene Location: 1809917-1811086 bp Ori: AUA04001.1 Feature: domain Description: dacD Location: 1809926-1811081 bp Feature: domain Description: dacD Location: 1 809926-1 81 1 081 bp Feature: gene Location: 1811356-1811607 bp Feature: gene Location: 1811607-1813091 bp Ori: AUA04003.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1812009-1812699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 2009-1 81 2699 bp Feature: gene Location: 1813173-1813646 bp Ori: AUA04004.1 Feature: domain Description: PRK10016 Location: 1813176-1813635 bp Feature: domain Description: PRK1 001 6 Location: 1 81 31 76-1 81 3635 bp Feature: gene Location: 1813745-1814803 bp Ori: AUA04005.1 Feature: domain Description: YccC Location: 1813751-1814789 bp Feature: domain Description: YccC Location: 1 81 3751 -1 81 4789 bp Feature: gene Location: 3108376-3109641 bp Ori: AUA05227.1 Feature: domain Description: umuC Location: 3108379-3109639 bp Feature: domain Description: umuC Location: 31 08379-31 09639 bp Feature: gene Location: 3109643-3110062 bp Ori: AUA05228.1 Feature: domain Description: PRK10276 Location: 3109646-3110057 bp Feature: domain Description: PRK1 0276 Location: 31 09646-31 1 0057 bp Feature: gene Location: 3110142-3111626 bp Ori: AUA05229.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3110544-3111234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 0544-31 1 1 234 bp Feature: gene Location: 3111626-3111877 bp Feature: gene Location: 3112425-3112514 bp Feature: gene Location: 3288740-3290005 bp Ori: AUA05408.1 Feature: domain Description: umuC Location: 3288743-3290003 bp Feature: domain Description: umuC Location: 3288743-3290003 bp Feature: gene Location: 3290008-3290427 bp Ori: AUA05409.1 Feature: domain Description: PRK10276 Location: 3290011-3290422 bp Feature: domain Description: PRK1 0276 Location: 329001 1 -3290422 bp Feature: gene Location: 3290506-3291990 bp Ori: AUA05410.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3290908-3291598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3290908-3291 598 bp Feature: gene Location: 3291990-3292241 bp Feature: gene Location: 3292608-3292850 bp Ori: AUA05412.1 Feature: domain Description: DinI Location: 3292659-3292839 bp Feature: domain Description: DinI Location: 3292659-3292839 bp Feature: gene Location: 3631088-3631966 bp Ori: AUA05731.1 Feature: domain Description: Phage_CI_repr Location: 3631115-3631298 bp Feature: domain Description: Phage_CI_repr Location: 3631 1 1 5-3631 298 bp Feature: domain Description: Phage_CI_repr Location: 3631427-3631619 bp Feature: domain Description: Phage_CI_repr Location: 3631 427-3631 61 9 bp Feature: domain Description: Phage_CI_C Location: 3631646-3631940 bp Feature: domain Description: Phage_CI_C Location: 3631 646-3631 940 bp Feature: gene Location: 3631978-3632922 bp Feature: gene Location: 3633021-3634505 bp Ori: AUA05733.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3633423-3634113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3633423-36341 1 3 bp Feature: gene Location: 3634505-3634756 bp Feature: gene Location: 3634924-3635976 bp Ori: AUA05735.1 Feature: domain Description: int Location: 3634927-3635926 bp Feature: domain Description: int Location: 3634927-3635926 bp Feature: gene Location: 4074500-4074817 bp Ori: AUA06122.1 Feature: domain Description: PRK10276 Location: 4074506-4074620 bp Feature: domain Description: PRK1 0276 Location: 4074506-4074620 bp Feature: domain Description: PRK10276 Location: 4074647-4074716 bp Feature: domain Description: PRK1 0276 Location: 4074647-407471 6 bp Feature: gene Location: 4074817-4075056 bp Feature: gene Location: 4075134-4076618 bp Ori: AUA06124.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4075536-4076226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4075536-4076226 bp Feature: gene Location: 4076618-4076869 bp Feature: gene Location: 4077071-4077280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP025009.1 Klebsiella pneumoniae strain AUSMDU00008119 plasmid pAUSMDU8119-1, complete sequence (176049 bp)
Overview 1 RT 1: 165726-168974 bp Neighborhood of RT #1 [165726, 168988] RVT-GII PRK10276 Feature: gene Location: 165726-165947 bp Feature: gene Location: 166209-166439 bp Feature: gene Location: 166673-168157 bp Ori: AUA07760.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167075-167765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167075-167765 bp Feature: gene Location: 168157-168408 bp Feature: gene Location: 168563-168988 bp Ori: AUA07762.1 Feature: domain Description: PRK10276 Location: 168566-168974 bp Feature: domain Description: PRK102 76 Location: 168566-168974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)