myRT

myRT report for GCA_002812545.1_ASM281254v1

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Seq: CP025048.1 Escherichia coli strain SC516 chromosome, complete genome (4792402 bp)
Overview 1 RT 1: 3154948-3158842 bp 2 RT 2: 3454975-3459574 bp Neighborhood of RT #1 [3154948, 3158841] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3454975, 3459576] Caudo_TAP SR_ResInv SR_ResInv RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 3154948-3155571 bp Feature: gene Location: 3155750-3156238 bp Feature: domain Description: PHA02517 Location: 3155753-3156203 bp Feature: domain Description: PHA0251 7 Location: 31 55753-31 56203 bp Feature: gene Location: 3156319-3157842 bp Ori: AUA41962.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3156592-3157324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 56592-31 57324 bp Feature: domain Description: GIIM Note: maturase Location: 3157399-3157597 bp Feature: domain Description: GIIM Note: maturase Location: 31 57399-31 57597 bp Feature: gene Location: 3158136-3158507 bp Feature: gene Location: 3158500-3158841 bp Feature: domain Description: PHA02517 Location: 3158521-3158842 bp Feature: domain Description: PHA0251 7 Location: 31 58521 -31 58842 bp Feature: gene Location: 3454975-3455103 bp Ori: AUA43589.1 Feature: domain Description: Caudo_TAP Location: 3454978-3455092 bp Feature: domain Description: Caudo_TAP Location: 3454978-3455092 bp Feature: gene Location: 3455161-3455410 bp Feature: domain Description: SR_ResInv Location: 3455173-3455284 bp Feature: domain Description: SR_ResInv Location: 34551 73-3455284 bp Feature: domain Description: SR_ResInv Location: 3455287-3455350 bp Feature: domain Description: SR_ResInv Location: 3455287-3455350 bp Feature: gene Location: 3455548-3457152 bp Ori: AUA42222.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3455839-3456430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3455839-3456430 bp Feature: domain Description: TIR_2 Location: 3456757-3457045 bp Feature: domain Description: TIR_2 Location: 3456757-3457045 bp Feature: gene Location: 3457510-3457770 bp Ori: AUA42223.1 Feature: domain Description: PRK10597 Location: 3457513-3457753 bp Feature: domain Description: PRK1 0597 Location: 345751 3-3457753 bp Feature: gene Location: 3457990-3459576 bp Ori: AUA42224.1 Gene: prfC Feature: domain Description: prfC Location: 3458008-3459574 bp Feature: domain Description: prfC Location: 3458008-3459574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Caudo_TAP (pfam02413), SR_ResInv (cd03768), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503)