myRT

myRT report for GCA_002812605.1_ASM281260v1

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Seq: CP025045.1 Clostridioides difficile strain W0023a chromosome (4110080 bp)
Overview 1 RT 1: 2362570-2367178 bp Neighborhood of RT #1 [2362570, 2367270] Acetyltransf_10 RVT-GII HNHc DUF3789 Rol_Rep_N Rep_trans Feature: gene Location: 2362570-2362950 bp Ori: AUA25981.1 Feature: domain Description: Acetyltransf_10 Location: 2362660-2362921 bp Feature: domain Description: Acetyltransf_1 0 Location: 2362660-2362921 bp Feature: gene Location: 2363028-2363189 bp Feature: gene Location: 2363356-2365266 bp Ori: AUA25983.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2363689-2364427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2363689-2364427 bp Feature: domain Description: HNHc Note: nucleases Location: 2364982-2365147 bp Feature: domain Description: HNHc Note: nucleases Location: 2364982-23651 47 bp Feature: gene Location: 2366008-2366142 bp Ori: AUA25984.1 Feature: domain Description: DUF3789 Location: 2366020-2366113 bp Feature: domain Description: DUF3789 Location: 2366020-23661 1 3 bp Feature: gene Location: 2366149-2367270 bp Ori: AUA25985.1 Feature: domain Description: Rol_Rep_N Location: 2366278-2366539 bp Feature: domain Description: Rol_Rep_N Location: 2366278-2366539 bp Feature: domain Description: Rep_trans Location: 2366563-2367178 bp Feature: domain Description: Rep_trans Location: 2366563-23671 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), RVT-GII, HNHc (smart00507), DUF3789 (pfam12664), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)