myRT

myRT report for GCA_002812665.1_ASM281266v1

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Seq: CP025038.1 Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_1, complete sequence (199686 bp)
Overview 1 RT 1: 161675-164937 bp Neighborhood of RT #1 [161675, 164937] PRK10276 RVT-GII Feature: gene Location: 161675-162100 bp Ori: AUA54125.1 Feature: domain Description: PRK10276 Location: 161678-162086 bp Feature: domain Description: PRK1 0276 Location: 1 61 678-1 62086 bp Feature: gene Location: 162255-162506 bp Feature: gene Location: 162506-163990 bp Ori: AUA54127.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162908-163598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 62908-1 63598 bp Feature: gene Location: 164224-164454 bp Feature: gene Location: 164716-164937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP025037.1 Klebsiella pneumoniae strain NU-CRE047 chromosome, complete genome (5537943 bp)
Overview 1 RT 1: 1851303-1856171 bp 2 RT 2: 3334739-3338837 bp 3 RT 3: 3721254-3726092 bp 4 RT 4: 4164645-4167422 bp Neighborhood of RT #1 [1851303, 1856185] dacD YkfC RVT-GII PRK10016 YccC Neighborhood of RT #2 [3334739, 3338848] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [3721254, 3726142] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #4 [4164645, 4167422] PRK10276 PRK10276 YkfC RVT-GII Feature: gene Location: 1851303-1852472 bp Ori: AUA50394.1 Feature: domain Description: dacD Location: 1851312-1852467 bp Feature: domain Description: dacD Location: 1851312 -1852 467 bp Feature: gene Location: 1852742-1852993 bp Feature: gene Location: 1853112-1854473 bp Gene: ltrA Feature: domain Description: YkfC Location: 1853265-1853406 bp Feature: domain Description: YkfC Location: 18532 65-1853406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853499-1854081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853499-1854081 bp Feature: gene Location: 1854555-1855028 bp Ori: AUA50396.1 Feature: domain Description: PRK10016 Location: 1854558-1855017 bp Feature: domain Description: PRK10016 Location: 1854558-1855017 bp Feature: gene Location: 1855127-1856185 bp Ori: AUA50397.1 Feature: domain Description: YccC Location: 1855133-1856171 bp Feature: domain Description: YccC Location: 1855133-1856171 bp Feature: gene Location: 3334739-3336004 bp Ori: AUA51752.1 Feature: domain Description: umuC Location: 3334742-3336002 bp Feature: domain Description: umuC Location: 3334742 -3336002 bp Feature: gene Location: 3336007-3336426 bp Ori: AUA51753.1 Feature: domain Description: PRK10276 Location: 3336010-3336421 bp Feature: domain Description: PRK102 76 Location: 3336010-333642 1 bp Feature: gene Location: 3336505-3337988 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3336907-3337009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3336907-3337009 bp Feature: gene Location: 3337988-3338239 bp Feature: gene Location: 3338606-3338848 bp Ori: AUA51755.1 Feature: domain Description: DinI Location: 3338657-3338837 bp Feature: domain Description: DinI Location: 3338657-3338837 bp Feature: gene Location: 3721254-3722132 bp Ori: AUA52125.1 Feature: domain Description: Phage_CI_repr Location: 3721281-3721464 bp Feature: domain Description: Phage_CI_repr Location: 372 12 81-372 1464 bp Feature: domain Description: Phage_CI_repr Location: 3721593-3721785 bp Feature: domain Description: Phage_CI_repr Location: 372 1593-372 1785 bp Feature: domain Description: Phage_CI_C Location: 3721812-3722106 bp Feature: domain Description: Phage_CI_C Location: 372 1812 -372 2 106 bp Feature: gene Location: 3722144-3723088 bp Feature: gene Location: 3723187-3724671 bp Ori: AUA52127.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3723589-3724279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372 3589-372 42 79 bp Feature: gene Location: 3724671-3724922 bp Feature: gene Location: 3725090-3726142 bp Ori: AUA52129.1 Feature: domain Description: int Location: 3725093-3726092 bp Feature: domain Description: int Location: 372 5093-372 6092 bp Feature: gene Location: 4164645-4164962 bp Ori: AUA52514.1 Feature: domain Description: PRK10276 Location: 4164651-4164765 bp Feature: domain Description: PRK102 76 Location: 4164651-4164765 bp Feature: domain Description: PRK10276 Location: 4164792-4164861 bp Feature: domain Description: PRK102 76 Location: 4164792 -4164861 bp Feature: gene Location: 4164962-4165201 bp Feature: gene Location: 4165279-4166760 bp Gene: ltrA Feature: domain Description: YkfC Location: 4165552-4165693 bp Feature: domain Description: YkfC Location: 4165552 -4165693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4165789-4166368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4165789-4166368 bp Feature: gene Location: 4166760-4167011 bp Feature: gene Location: 4167213-4167422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), YkfC (COG3344), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)
int (PHA02601)