myRT

myRT report for GCA_002812825.1_ASM281282v1

Download annotations/find similar RTs

Seq: CP025049.1 Pseudomonas aeruginosa strain PB369 chromosome, complete genome (6526814 bp)
Overview 1 RT 1: 649307-659615 bp Neighborhood of RT #1 [649307, 659617] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 649307-650428 bp Ori: AUA69057.1 Feature: domain Description: COG3177 Location: 649325-650417 bp Feature: domain Description: COG31 77 Location: 649325-65041 7 bp Feature: gene Location: 650690-650851 bp Feature: gene Location: 651154-652839 bp Ori: AUA69059.1 Gene: ltrA Feature: domain Description: RVT_N Location: 651211-651451 bp Feature: domain Description: RVT_N Location: 651 21 1 -651 451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651499-652135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651 499-6521 35 bp Feature: domain Description: GIIM Note: maturase Location: 652189-652420 bp Feature: domain Description: GIIM Note: maturase Location: 6521 89-652420 bp Feature: domain Description: HNH Note: nucleases Location: 652672-652810 bp Feature: domain Description: HNH Note: nucleases Location: 652672-65281 0 bp Feature: gene Location: 653920-657657 bp Ori: AUA69060.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 654028-654685 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 654028-654685 bp Feature: domain Description: PRK09776 Location: 654898-655369 bp Feature: domain Description: PRK09776 Location: 654898-655369 bp Feature: domain Description: PAS Location: 655426-655951 bp Feature: domain Description: PAS Location: 655426-655951 bp Feature: domain Description: PRK10060 Location: 655960-657607 bp Feature: domain Description: PRK1 0060 Location: 655960-657607 bp Feature: gene Location: 657764-659617 bp Ori: AUA69061.1 Feature: domain Description: PRK05658 Location: 657776-659615 bp Feature: domain Description: PRK05658 Location: 657776-65961 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)