myRT

myRT report for GCA_002813535.1_ASM281353v1

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Seq: CP025076.1 Streptococcus pneumoniae strain 19F chromosome, complete genome (2125517 bp)
Overview 1 RT 1: 1221042-1226079 bp 2 RT 2: 1586240-1589416 bp 3 RT 3: 1628272-1632892 bp Neighborhood of RT #1 [1221042, 1226079] DUF3687 MFS_MefA_like RVT-GII RVT-GII Neighborhood of RT #2 [1586240, 1589463] RVT-GII RVT-GII GIIM YgiN Neighborhood of RT #3 [1628272, 1632900] RVT-GII GIIM COG3335 COG3335 Cps2a Feature: gene Location: 1221042-1221173 bp Ori: AUB33297.1 Feature: domain Description: DUF3687 Location: 1221054-1221171 bp Feature: domain Description: DUF3687 Location: 1 221 054-1 221 1 71 bp Feature: gene Location: 1221494-1222672 bp Ori: AUB33298.1 Feature: domain Description: MFS_MefA_like Location: 1221509-1222652 bp Feature: domain Description: MFS_MefA_like Location: 1 221 509-1 222652 bp Feature: gene Location: 1223128-1224100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1223134-1223620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2231 34-1 223620 bp Feature: gene Location: 1224104-1224385 bp Ori: AUB33299.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224308-1224380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 224308-1 224380 bp Feature: gene Location: 1225142-1225339 bp Feature: gene Location: 1225471-1226079 bp Feature: gene Location: 1586240-1586458 bp Feature: gene Location: 1586546-1586737 bp Feature: gene Location: 1587793-1588167 bp Ori: AUB34170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1587958-1588165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 587958-1 5881 65 bp Feature: gene Location: 1588209-1588621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588212-1588572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58821 2-1 588572 bp Feature: gene Location: 1588644-1589029 bp Feature: domain Description: GIIM Note: maturase Location: 1588650-1588839 bp Feature: domain Description: GIIM Note: maturase Location: 1 588650-1 588839 bp Feature: gene Location: 1589098-1589463 bp Ori: AUB33641.1 Feature: domain Description: YgiN Location: 1589134-1589416 bp Feature: domain Description: YgiN Location: 1 5891 34-1 58941 6 bp Feature: gene Location: 1628272-1628445 bp Feature: gene Location: 1628431-1628526 bp Feature: gene Location: 1629086-1630363 bp Ori: AUB33679.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629290-1629905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 629290-1 629905 bp Feature: domain Description: GIIM Note: maturase Location: 1629959-1630172 bp Feature: domain Description: GIIM Note: maturase Location: 1 629959-1 6301 72 bp Feature: gene Location: 1630420-1631205 bp Feature: domain Description: COG3335 Location: 1630426-1630801 bp Feature: domain Description: COG3335 Location: 1 630426-1 630801 bp Feature: domain Description: COG3335 Location: 1630924-1631197 bp Feature: domain Description: COG3335 Location: 1 630924-1 631 1 97 bp Feature: gene Location: 1631455-1632900 bp Ori: AUB33680.1 Feature: domain Description: Cps2a Location: 1631893-1632892 bp Feature: domain Description: Cps2a Location: 1 631 893-1 632892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3687 (pfam12459), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388), YgiN (COG1359), COG3335 (Transposase ), Cps2a (COG1316)