myRT

myRT report for GCA_002813715.1_ASM281371v1

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Seq: CP017601.1 Legionella pneumophila strain D6026 chromosome, complete genome (3459119 bp)
Overview 1 RT 1: 800691-805031 bp 2 RT 2: 930107-935641 bp 3 RT 3: 2122491-2128295 bp 4 RT 4: 2271358-2278110 bp Neighborhood of RT #1 [800691, 805084] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 COG3547 Neighborhood of RT #2 [930107, 935799] GT_WbpL_WbcO_like Beta_helix RVT-GII UDP_G4E_4_SDR_e GT_WbpL_WbcO_like Neighborhood of RT #3 [2122491, 2128295] ACH1 RVT-UG18 Neighborhood of RT #4 [2271358, 2278110] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 800691-801248 bp Feature: domain Description: HTH_23 Location: 800778-800901 bp Feature: domain Description: HTH_23 Location: 800778-800901 bp Feature: domain Description: HTH_33 Location: 800994-801159 bp Feature: domain Description: HTH_33 Location: 800994-801 1 59 bp Feature: gene Location: 801341-801634 bp Ori: AUB67985.1 Feature: domain Description: InsE Location: 801350-801614 bp Feature: domain Description: InsE Location: 801 350-801 61 4 bp Feature: gene Location: 802171-803325 bp Ori: AUB67986.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802375-802573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802375-802573 bp Feature: domain Description: RVT_1 Location: 802627-802945 bp Feature: domain Description: RVT_1 Location: 802627-802945 bp Feature: domain Description: GIIM Note: maturase Location: 803023-803242 bp Feature: domain Description: GIIM Note: maturase Location: 803023-803242 bp Feature: gene Location: 803431-803688 bp Ori: AUB67987.1 Feature: domain Description: PHA02517 Location: 803434-803650 bp Feature: domain Description: PHA0251 7 Location: 803434-803650 bp Feature: gene Location: 804047-805084 bp Ori: AUB67988.1 Feature: domain Description: COG3547 Location: 804065-805031 bp Feature: domain Description: COG3547 Location: 804065-805031 bp Feature: gene Location: 930107-931024 bp Ori: AUB70174.1 Feature: domain Description: GT_WbpL_WbcO_like Location: 930110-930863 bp Feature: domain Description: GT_WbpL_WbcO_like Location: 9301 1 0-930863 bp Feature: gene Location: 931139-932383 bp Ori: AUB68070.1 Feature: domain Description: Beta_helix Location: 931262-931640 bp Feature: domain Description: Beta_helix Location: 931 262-931 640 bp Feature: gene Location: 933070-933807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933274-933769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933274-933769 bp Feature: gene Location: 933858-934814 bp Ori: AUB68071.1 Feature: domain Description: UDP_G4E_4_SDR_e Location: 933867-934779 bp Feature: domain Description: UDP_G4E_4_SDR_e Location: 933867-934779 bp Feature: gene Location: 934885-935799 bp Ori: AUB70175.1 Feature: domain Description: GT_WbpL_WbcO_like Location: 934888-935641 bp Feature: domain Description: GT_WbpL_WbcO_like Location: 934888-935641 bp Feature: gene Location: 2122491-2123804 bp Ori: AUB69050.1 Feature: domain Description: ACH1 Location: 2122497-2123793 bp Feature: domain Description: ACH1 Location: 21 22497-21 23793 bp Feature: gene Location: 2124610-2125623 bp Feature: gene Location: 2126121-2126483 bp Ori: AUB69052.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2126124-2126481 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 261 24-21 26481 bp Feature: gene Location: 2126508-2126771 bp Feature: gene Location: 2126982-2128295 bp Feature: gene Location: 2271358-2271735 bp Ori: AUB69177.1 Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2271385-2271721 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2271 385-2271 721 bp Feature: gene Location: 2272041-2273492 bp Ori: AUB69178.1 Feature: domain Description: Tnp_DNA_bind Location: 2272080-2272248 bp Feature: domain Description: Tnp_DNA_bind Location: 2272080-2272248 bp Feature: domain Description: DDE_Tnp_1 Location: 2272905-2273199 bp Feature: domain Description: DDE_Tnp_1 Location: 2272905-22731 99 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2273205-2273484 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2273205-2273484 bp Feature: gene Location: 2273563-2275083 bp Ori: AUB69179.1 Feature: domain Description: RVT_N Location: 2273620-2273863 bp Feature: domain Description: RVT_N Location: 2273620-2273863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2273908-2274532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2273908-2274532 bp Feature: domain Description: GIIM Note: maturase Location: 2274583-2274817 bp Feature: domain Description: GIIM Note: maturase Location: 2274583-227481 7 bp Feature: gene Location: 2275931-2276305 bp Ori: AUB69180.1 Feature: domain Description: Tra_M Location: 2275979-2276174 bp Feature: domain Description: Tra_M Location: 2275979-22761 74 bp Feature: gene Location: 2276503-2278110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), GT_WbpL_WbcO_like (cd06854), Beta_helix (pfam13229)
UDP_G4E_4_SDR_e (cd05232), ACH1 (COG0427), RVT-UG18, NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), Tra_M (pfam05261)