myRT

myRT report for GCA_002813755.1_ASM281375v1

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Seq: CP018061.1 Enterococcus mundtii strain DSM 4838, complete genome (3357452 bp)
Overview 1 RT 1: 571166-575696 bp 2 RT 2: 2412470-2419119 bp Neighborhood of RT #1 [571166, 575701] HAD_BPGM-like RadC RVT-GII HNHc radc CspC Neighborhood of RT #2 [2412470, 2419499] RVT-Retrons RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 571166-571819 bp Ori: AUB51927.1 Feature: domain Description: HAD_BPGM-like Location: 571181-571736 bp Feature: domain Description: HAD_BPGM-like Location: 571 1 81 -571 736 bp Feature: gene Location: 571883-572498 bp Feature: domain Description: RadC Location: 571907-572417 bp Feature: domain Description: RadC Location: 571 907-57241 7 bp Feature: gene Location: 573171-575090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573468-574209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573468-574209 bp Feature: domain Description: HNHc Note: nucleases Location: 574794-574941 bp Feature: domain Description: HNHc Note: nucleases Location: 574794-574941 bp Feature: gene Location: 575226-575351 bp Ori: AUB51928.1 Feature: domain Description: radc Location: 575232-575340 bp Feature: domain Description: radc Location: 575232-575340 bp Feature: gene Location: 575501-575701 bp Ori: AUB51929.1 Feature: domain Description: CspC Location: 575504-575696 bp Feature: domain Description: CspC Location: 575504-575696 bp Feature: gene Location: 2412470-2412817 bp Feature: gene Location: 2414238-2414468 bp Feature: gene Location: 2414491-2414808 bp Ori: AUB53519.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2414497-2414734 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 241 4497-241 4734 bp Feature: gene Location: 2414856-2415218 bp Ori: AUB53520.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2414934-2415186 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 241 4934-241 51 86 bp Feature: gene Location: 2415532-2417448 bp Ori: AUB53521.1 Feature: domain Description: DEXQc_UvrD Location: 2415571-2415895 bp Feature: domain Description: DEXQc_UvrD Location: 241 5571 -241 5895 bp Feature: domain Description: DEXQc_UvrD Location: 2415931-2416198 bp Feature: domain Description: DEXQc_UvrD Location: 241 5931 -241 61 98 bp Feature: domain Description: UvrD Location: 2417164-2417383 bp Feature: domain Description: UvrD Location: 241 71 64-241 7383 bp Feature: gene Location: 2417430-2419499 bp Ori: AUB53522.1 Feature: domain Description: AAA_15 Location: 2417433-2418633 bp Feature: domain Description: AAA_1 5 Location: 241 7433-241 8633 bp Feature: domain Description: TOPRIM_OLD Location: 2418789-2419119 bp Feature: domain Description: TOPRIM_OLD Location: 241 8789-241 91 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_BPGM-like (cd16423), RadC (pfam04002), RVT-GII, HNHc (smart00507), radc (TIGR00608), CspC (COG1278), RVT-Retrons, DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175)
TOPRIM_OLD (cd01026)