myRT

myRT report for GCA_002831565.1_ASM283156v1

Download annotations/find similar RTs

Seq: CP025096.1 Spirosoma sp. HA7 chromosome, complete genome (8794837 bp)
Overview 1 RT 1: 7562016-7565633 bp 2 RT 2: 8601428-8607632 bp Neighborhood of RT #1 [7562016, 7565641] Transposase_20 RVT_N RVT-GII GIIM HTH_21 InsE Neighborhood of RT #2 [8601428, 8607664] CarbopepD_reg_2 ligand_gated_channel RVT_N RVT-GII GIIM HNHc DEDD_Tnp_IS110 Transposase_20 HTH_Tnp_1 Feature: gene Location: 7562016-7562294 bp Feature: gene Location: 7562260-7562604 bp Ori: AUD06041.1 Feature: domain Description: Transposase_20 Location: 7562284-7562473 bp Feature: domain Description: Transposase_20 Location: 7562284-7562473 bp Feature: gene Location: 7562808-7564331 bp Ori: AUD07577.1 Gene: ltrA Feature: domain Description: RVT_N Location: 7562844-7563030 bp Feature: domain Description: RVT_N Location: 7562844-7563030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7563114-7563876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75631 1 4-7563876 bp Feature: domain Description: GIIM Note: maturase Location: 7563951-7564176 bp Feature: domain Description: GIIM Note: maturase Location: 7563951 -75641 76 bp Feature: gene Location: 7564923-7565402 bp Ori: AUD06042.1 Feature: domain Description: HTH_21 Location: 7565133-7565280 bp Feature: domain Description: HTH_21 Location: 75651 33-7565280 bp Feature: gene Location: 7565342-7565641 bp Ori: AUD06043.1 Feature: domain Description: InsE Location: 7565351-7565633 bp Feature: domain Description: InsE Location: 7565351 -7565633 bp Feature: gene Location: 8601428-8603632 bp Ori: AUD06904.1 Feature: domain Description: CarbopepD_reg_2 Location: 8601509-8601752 bp Feature: domain Description: CarbopepD_reg_2 Location: 8601 509-8601 752 bp Feature: domain Description: ligand_gated_channel Location: 8601800-8603522 bp Feature: domain Description: ligand_gated_channel Location: 8601 800-8603522 bp Feature: gene Location: 8603673-8604148 bp Feature: gene Location: 8604740-8606509 bp Ori: AUD06905.1 Gene: ltrA Feature: domain Description: RVT_N Location: 8604836-8605082 bp Feature: domain Description: RVT_N Location: 8604836-8605082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8605130-8605778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86051 30-8605778 bp Feature: domain Description: GIIM Note: maturase Location: 8605850-8606084 bp Feature: domain Description: GIIM Note: maturase Location: 8605850-8606084 bp Feature: domain Description: HNHc Note: nucleases Location: 8606288-8606447 bp Feature: domain Description: HNHc Note: nucleases Location: 8606288-8606447 bp Feature: gene Location: 8606644-8607468 bp Ori: AUD06906.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 8606689-8606857 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 8606689-8606857 bp Feature: domain Description: Transposase_20 Location: 8607025-8607277 bp Feature: domain Description: Transposase_20 Location: 8607025-8607277 bp Feature: gene Location: 8607401-8607664 bp Ori: AUD06907.1 Feature: domain Description: HTH_Tnp_1 Location: 8607416-8607632 bp Feature: domain Description: HTH_Tnp_1 Location: 860741 6-8607632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), InsE (COG2963), CarbopepD_reg_2 (pfam13715), ligand_gated_channel (cd01347), HNHc (smart00507), DEDD_Tnp_IS110 (pfam01548)
HTH_Tnp_1 (pfam01527)