myRT

myRT report for GCA_002831645.1_ASM283164v1

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Seq: CP025117.1 Olleya sp. Bg11-27 chromosome, complete genome (4314320 bp)
Overview 1 RT 1: 2834232-2839954 bp 2 RT 2: 3774332-3781250 bp Neighborhood of RT #1 [2834232, 2839954] DUF4132 RVT-UNC Neighborhood of RT #2 [3774332, 3781366] DUF772 DDE_Tnp_1_6 RVT-GII GIIM TPR TPR TPR TPR DUF772 DDE_Tnp_1_6 Feature: gene Location: 2834232-2834651 bp Feature: gene Location: 2834656-2838141 bp Ori: AUC76462.1 Feature: domain Description: DUF4132 Location: 2836933-2837470 bp Feature: domain Description: DUF41 32 Location: 2836933-2837470 bp Feature: gene Location: 2838134-2838766 bp Ori: AUC76463.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 2838287-2838746 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2838287-2838746 bp Feature: gene Location: 2839001-2839288 bp Feature: gene Location: 2839319-2839954 bp Feature: gene Location: 3774332-3775892 bp Feature: domain Description: DUF772 Location: 3774485-3774707 bp Feature: domain Description: DUF772 Location: 3774485-3774707 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3775406-3775775 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3775406-3775775 bp Feature: gene Location: 3776293-3776676 bp Feature: gene Location: 3776804-3778057 bp Ori: AUC77244.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3777017-3777677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377701 7-3777677 bp Feature: domain Description: GIIM Note: maturase Location: 3777761-3777980 bp Feature: domain Description: GIIM Note: maturase Location: 3777761 -3777980 bp Feature: gene Location: 3778856-3779563 bp Ori: AUC77245.1 Feature: domain Description: TPR Location: 3778925-3779009 bp Feature: domain Description: TPR Location: 3778925-3779009 bp Feature: domain Description: TPR Location: 3779033-3779126 bp Feature: domain Description: TPR Location: 3779033-37791 26 bp Feature: domain Description: TPR Location: 3779135-3779213 bp Feature: domain Description: TPR Location: 37791 35-377921 3 bp Feature: domain Description: TPR Location: 3779324-3779411 bp Feature: domain Description: TPR Location: 3779324-377941 1 bp Feature: gene Location: 3779807-3781366 bp Ori: AUC77246.1 Feature: domain Description: DUF772 Location: 3779960-3780182 bp Feature: domain Description: DUF772 Location: 3779960-37801 82 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3780881-3781250 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3780881 -3781 250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4132 (pfam13569), RVT-UG9/RVT-UG17/RVT-DGRs/RVT-UG19(RVT-UNC), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), TPR (smart00028)