myRT

myRT report for GCA_002833425.1_ASM283342v1

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Seq: CP025144.1 Klebsiella pneumoniae strain NR5632 plasmid NR5632_p1, complete sequence (204123 bp)
Overview 1 RT 1: 27277-33896 bp Neighborhood of RT #1 [27277, 34786] P Q RVT-AbiP2 Phage_GPA Feature: gene Location: 27277-29049 bp Ori: AUD37011.1 Feature: domain Description: P Location: 27304-29035 bp Feature: domain Description: P Location: 27304-29035 bp Feature: gene Location: 29049-30083 bp Ori: AUD37012.1 Feature: domain Description: Q Location: 29052-30075 bp Feature: domain Description: Q Location: 29052-30075 bp Feature: gene Location: 30478-32022 bp Ori: AUD37013.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30895-31348 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30895-31 348 bp Feature: gene Location: 32188-32406 bp Feature: gene Location: 32510-34786 bp Ori: AUD37014.1 Feature: domain Description: Phage_GPA Location: 32909-33896 bp Feature: domain Description: Phage_GPA Location: 32909-33896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: CP025143.1 Klebsiella pneumoniae strain NR5632 chromosome, complete genome (5388622 bp)
Overview 1 RT 1: 165110-168381 bp 2 RT 2: 1332166-1334695 bp 3 RT 3: 3221759-3225857 bp Neighborhood of RT #1 [165110, 168395] RVT-GII PRK10276 Neighborhood of RT #2 [1332166, 1334895] HTH_Hin_like RVT-GII PRK10276 Neighborhood of RT #3 [3221759, 3225868] umuC PRK10276 RVT-GII DinI Feature: gene Location: 165110-165331 bp Feature: gene Location: 165593-165823 bp Feature: gene Location: 166057-167565 bp Ori: AUD31985.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166459-167173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166459-167173 bp Feature: gene Location: 167565-167816 bp Feature: gene Location: 167970-168395 bp Ori: AUD31987.1 Feature: domain Description: PRK10276 Location: 167973-168381 bp Feature: domain Description: PRK102 76 Location: 167973-168381 bp Feature: gene Location: 1332166-1332315 bp Feature: domain Description: HTH_Hin_like Location: 1332181-1332304 bp Feature: domain Description: HTH_Hin_like Location: 1332 181-1332 304 bp Feature: gene Location: 1332520-1332771 bp Feature: gene Location: 1332771-1334255 bp Ori: AUD33113.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1333173-1333863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1333173-1333863 bp Feature: gene Location: 1334333-1334572 bp Feature: gene Location: 1334575-1334895 bp Ori: AUD33115.1 Feature: domain Description: PRK10276 Location: 1334578-1334695 bp Feature: domain Description: PRK102 76 Location: 1334578-1334695 bp Feature: gene Location: 3221759-3223024 bp Ori: AUD34833.1 Feature: domain Description: umuC Location: 3221762-3223022 bp Feature: domain Description: umuC Location: 32 2 1762 -32 2 302 2 bp Feature: gene Location: 3223027-3223446 bp Ori: AUD34834.1 Feature: domain Description: PRK10276 Location: 3223030-3223441 bp Feature: domain Description: PRK102 76 Location: 32 2 3030-32 2 3441 bp Feature: gene Location: 3223525-3225009 bp Ori: AUD34835.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3223927-3224617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 2 392 7-32 2 4617 bp Feature: gene Location: 3225009-3225260 bp Feature: gene Location: 3225626-3225868 bp Ori: AUD34837.1 Feature: domain Description: DinI Location: 3225677-3225857 bp Feature: domain Description: DinI Location: 32 2 5677-32 2 5857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), HTH_Hin_like (cd00569), umuC (PRK03609), DinI (pfam06183)

Seq: CP025145.1 Klebsiella pneumoniae strain NR5632 plasmid NR5632_p2, complete sequence (149158 bp)
Overview 1 RT 1: 23802-27064 bp Neighborhood of RT #1 [23802, 27064] PRK10276 RVT-GII Feature: gene Location: 23802-24227 bp Ori: AUD37237.1 Feature: domain Description: PRK10276 Location: 23805-24213 bp Feature: domain Description: PRK10276 Location: 23 805-24213 bp Feature: gene Location: 24382-24633 bp Feature: gene Location: 24633-26117 bp Ori: AUD37239.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25035-25725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2503 5-25725 bp Feature: gene Location: 26351-26581 bp Feature: gene Location: 26843-27064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII