myRT

myRT report for GCA_002833485.1_ASM283348v1

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Seq: CP025122.1 Bacillus sp. HBCD-sjtu chromosome, complete genome (5230501 bp)
Overview 1 RT 1: 1133664-1138829 bp 2 RT 2: 2352822-2356016 bp Neighborhood of RT #1 [1133664, 1138885] YugN amiF RVT-GII HNHc amiF caa3_CtaG Neighborhood of RT #2 [2352822, 2356039] Transposase_20 RVT-GII PRK10420 DUF4870 Feature: gene Location: 1133664-1134029 bp Ori: AUD22094.1 Feature: domain Description: YugN Location: 1133685-1133931 bp Feature: domain Description: YugN Location: 1 1 33685-1 1 33931 bp Feature: gene Location: 1134076-1134699 bp Gene: amiF Feature: domain Description: amiF Location: 1134079-1134694 bp Feature: domain Description: amiF Location: 1 1 34079-1 1 34694 bp Feature: gene Location: 1134816-1136648 bp Ori: AUD22095.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1135116-1135821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 351 1 6-1 1 35821 bp Feature: domain Description: HNHc Note: nucleases Location: 1136400-1136532 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 36400-1 1 36532 bp Feature: gene Location: 1137382-1137753 bp Gene: amiF Feature: domain Description: amiF Location: 1137385-1137754 bp Feature: domain Description: amiF Location: 1 1 37385-1 1 37754 bp Feature: gene Location: 1137980-1138885 bp Ori: AUD22096.1 Gene: ctaG Feature: domain Description: caa3_CtaG Location: 1137989-1138829 bp Feature: domain Description: caa3_CtaG Location: 1 1 37989-1 1 38829 bp Feature: gene Location: 2352822-2353124 bp Feature: gene Location: 2353220-2353405 bp Feature: domain Description: Transposase_20 Location: 2353226-2353355 bp Feature: domain Description: Transposase_20 Location: 2353226-2353355 bp Feature: gene Location: 2353335-2353508 bp Ori: AUD23366.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2353338-2353446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2353338-2353446 bp Feature: gene Location: 2353766-2355424 bp Ori: AUD23367.1 Feature: domain Description: PRK10420 Location: 2353769-2355422 bp Feature: domain Description: PRK1 0420 Location: 2353769-2355422 bp Feature: gene Location: 2355722-2356039 bp Ori: AUD23368.1 Feature: domain Description: DUF4870 Location: 2355740-2356016 bp Feature: domain Description: DUF4870 Location: 2355740-235601 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507), caa3_CtaG (TIGR02737), Transposase_20 (pfam02371), PRK10420 (L-lactate permease; Provisional), DUF4870 (pfam09685)