myRT

myRT report for GCA_002843235.3_ASM284323v3

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Seq: CP031123.2 Providencia sp. WCHPHu000369 strain WCHPr000369 chromosome, complete genome (4573616 bp)
Overview 1 RT 1: 1731305-1735525 bp Neighborhood of RT #1 [1731305, 1735525] TIGR02646 COG3950 RVT-Retrons ptaRNA1_toxin Feature: gene Location: 1731305-1731976 bp Ori: AXH61330.1 Feature: domain Description: TIGR02646 Location: 1731374-1731794 bp Feature: domain Description: TIGR02646 Location: 1 731 374-1 731 794 bp Feature: gene Location: 1731982-1733622 bp Ori: AXH61329.1 Feature: domain Description: COG3950 Location: 1732180-1733479 bp Feature: domain Description: COG3950 Location: 1 7321 80-1 733479 bp Feature: gene Location: 1733615-1734547 bp Ori: AXH61328.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1733717-1734308 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 73371 7-1 734308 bp Feature: gene Location: 1734971-1735198 bp Ori: AXH61327.1 Feature: domain Description: ptaRNA1_toxin Location: 1734974-1735181 bp Feature: domain Description: ptaRNA1 _toxin Location: 1 734974-1 7351 81 bp Feature: gene Location: 1735271-1735525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, ptaRNA1_toxin (pfam12703)

Seq: CP031121.1 Providencia sp. WCHPHu000369 strain WCHPr000369 plasmid pIMP4_000369, complete sequence (18784 bp)
Overview 1 RT 1: 7731-12273 bp Neighborhood of RT #1 [7731, 12275] N6_acetyl_AAC6 LbH_XAT RVT-GII GIIM Multi_Drug_Res PRK13753 Feature: gene Location: 7731-8285 bp Ori: AXH60578.1 Feature: domain Description: N6_acetyl_AAC6 Location: 7737-8283 bp Feature: domain Description: N6_acetyl_AAC6 Location: 7737-82 83 bp Feature: gene Location: 8380-9012 bp Ori: AXH60579.1 Feature: domain Description: LbH_XAT Location: 8446-8926 bp Feature: domain Description: LbH_XAT Location: 8446-892 6 bp Feature: gene Location: 9084-10415 bp Ori: AXH60580.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9363-9981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9363-9981 bp Feature: domain Description: GIIM Note: maturase Location: 10026-10248 bp Feature: domain Description: GIIM Note: maturase Location: 1002 6-102 48 bp Feature: gene Location: 11095-11442 bp Ori: AXH60581.1 Feature: domain Description: Multi_Drug_Res Location: 11104-11377 bp Feature: domain Description: Multi_Drug_Res Location: 11104-11377 bp Feature: gene Location: 11436-12275 bp Ori: AXH60582.1 Gene: sul1 Feature: domain Description: PRK13753 Location: 11439-12273 bp Feature: domain Description: PRK13753 Location: 11439-12 2 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), LbH_XAT (cd03349), RVT-GII, GIIM (pfam08388), Multi_Drug_Res (pfam00893), PRK13753 (dihydropteroate synthase; Provisional)