myRT

myRT report for GCA_002848385.1_ASM284838v1

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Seq: CP025425.1 Enterococcus faecium strain SC4 chromosome, complete genome (2772425 bp)
Overview 1 RT 1: 2645457-2650261 bp Neighborhood of RT #1 [2645457, 2650275] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 2645457-2646641 bp Ori: AUH48743.1 Feature: domain Description: HTH_XRE Location: 2645487-2645631 bp Feature: domain Description: HTH_XRE Location: 2645487-2645631 bp Feature: domain Description: Rol_Rep_N Location: 2645664-2645928 bp Feature: domain Description: Rol_Rep_N Location: 2645664-2645928 bp Feature: domain Description: Rep_trans Location: 2645952-2646564 bp Feature: domain Description: Rep_trans Location: 2645952-2646564 bp Feature: gene Location: 2646638-2646775 bp Ori: AUH48744.1 Feature: domain Description: DUF3789 Location: 2646665-2646758 bp Feature: domain Description: DUF3789 Location: 2646665-2646758 bp Feature: gene Location: 2647521-2649431 bp Ori: AUH48745.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2647854-2648592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2647854-2648592 bp Feature: domain Description: HNHc Note: nucleases Location: 2649147-2649312 bp Feature: domain Description: HNHc Note: nucleases Location: 26491 47-264931 2 bp Feature: gene Location: 2649535-2649759 bp Feature: gene Location: 2649772-2650275 bp Ori: AUH48747.1 Feature: domain Description: ArdA Location: 2649790-2650261 bp Feature: domain Description: ArdA Location: 2649790-2650261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: CP025426.1 Enterococcus faecium strain SC4 plasmid p1, complete sequence (253120 bp)
Overview 1 RT 1: 191376-196656 bp Neighborhood of RT #1 [191376, 197348] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 191376-192581 bp Ori: AUH49111.1 Feature: domain Description: Glucosaminidase Location: 191652-192048 bp Feature: domain Description: Glucosaminidase Location: 191652 -192 048 bp Feature: domain Description: Peptidase_M23 Location: 192225-192462 bp Feature: domain Description: Peptidase_M2 3 Location: 192 2 2 5-192 462 bp Feature: gene Location: 192581-192958 bp Feature: gene Location: 193089-194966 bp Ori: AUH49112.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193404-194142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193404-194142 bp Feature: domain Description: HNHc Note: nucleases Location: 194700-194853 bp Feature: domain Description: HNHc Note: nucleases Location: 194700-194853 bp Feature: gene Location: 195153-195386 bp Feature: gene Location: 195654-197348 bp Ori: AUH49114.1 Feature: domain Description: VirB4 Location: 195972-196656 bp Feature: domain Description: VirB4 Location: 195972 -196656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)