myRT

myRT report for GCA_002848605.1_ASM284860v1

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Seq: CP025517.1 Klebsiella pneumoniae strain 002SK2 plasmid p002SK2_B, complete sequence (77809 bp)
Overview 1 RT 1: 63896-67638 bp Neighborhood of RT #1 [63896, 67655] ArdC RVT-GII PRK10276 Feature: gene Location: 63896-64861 bp Ori: AUH99592.1 Feature: domain Description: ArdC Location: 64022-64856 bp Feature: domain Description: ArdC Location: 64022-64856 bp Feature: gene Location: 65069-65338 bp Feature: gene Location: 65331-66815 bp Ori: AUH99594.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65733-66423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65733-66423 bp Feature: gene Location: 66815-67066 bp Feature: gene Location: 67224-67655 bp Ori: AUH99596.1 Feature: domain Description: PRK10276 Location: 67275-67638 bp Feature: domain Description: PRK1 0276 Location: 67275-67638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP025515.1 Klebsiella pneumoniae strain 002SK2 chromosome, complete genome (5393461 bp)
Overview 1 RT 1: 1359300-1363046 bp 2 RT 2: 2106017-2109590 bp 3 RT 3: 2182389-2186495 bp 4 RT 4: 3466271-3472055 bp 5 RT 5: 3544210-3549088 bp 6 RT 6: 4681698-4688144 bp Neighborhood of RT #1 [1359300, 1363243] OafA RVT-GII PRK10276 Neighborhood of RT #2 [2106017, 2109590] YafY RVT-GII PRK10597 Neighborhood of RT #3 [2182389, 2186497] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3466271, 3472055] RVT-GII RVT-GII Neighborhood of RT #5 [3544210, 3549093] YccC PRK10016 RVT-GII dacD Neighborhood of RT #6 [4681698, 4689001] RVT-Retrons HTH_XRE DinI RVT-GII Phage_GPA Feature: gene Location: 1359300-1360421 bp Ori: AUH95669.1 Feature: domain Description: OafA Location: 1359396-1360392 bp Feature: domain Description: OafA Location: 1359396-1360392 bp Feature: gene Location: 1360874-1361125 bp Feature: gene Location: 1361125-1362609 bp Ori: AUH95671.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1361527-1362217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136152 7-1362 2 17 bp Feature: gene Location: 1362687-1362926 bp Feature: gene Location: 1362926-1363243 bp Ori: AUH95673.1 Feature: domain Description: PRK10276 Location: 1362932-1363046 bp Feature: domain Description: PRK102 76 Location: 1362 932 -1363046 bp Feature: gene Location: 2106017-2106706 bp Ori: AUH96297.1 Feature: domain Description: YafY Location: 2106020-2106665 bp Feature: domain Description: YafY Location: 2 10602 0-2 106665 bp Feature: gene Location: 2107240-2107491 bp Feature: gene Location: 2107491-2108975 bp Ori: AUH96299.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2107893-2108583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 107893-2 108583 bp Feature: gene Location: 2109054-2109288 bp Feature: domain Description: PRK10597 Location: 2109057-2109216 bp Feature: domain Description: PRK10597 Location: 2 109057-2 1092 16 bp Feature: gene Location: 2109351-2109590 bp Feature: gene Location: 2182389-2182631 bp Ori: AUH96373.1 Feature: domain Description: DinI Location: 2182440-2182620 bp Feature: domain Description: DinI Location: 2 182 440-2 182 62 0 bp Feature: gene Location: 2182997-2183248 bp Feature: gene Location: 2183248-2184732 bp Ori: AUH96375.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2183650-2184340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 183650-2 184340 bp Feature: gene Location: 2184810-2185229 bp Ori: AUH96376.1 Feature: domain Description: PRK10276 Location: 2184813-2185224 bp Feature: domain Description: PRK102 76 Location: 2 184813-2 1852 2 4 bp Feature: gene Location: 2185232-2186497 bp Ori: AUH96377.1 Feature: domain Description: umuC Location: 2185235-2186495 bp Feature: domain Description: umuC Location: 2 1852 35-2 186495 bp Feature: gene Location: 3466271-3466641 bp Feature: gene Location: 3466598-3466837 bp Feature: gene Location: 3466914-3468398 bp Ori: AUH97467.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3467316-3468006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3467316-3468006 bp Feature: gene Location: 3468398-3468649 bp Feature: gene Location: 3468823-3470307 bp Ori: AUH97469.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3469225-3469915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34692 2 5-3469915 bp Feature: gene Location: 3470307-3470558 bp Feature: gene Location: 3471219-3472055 bp Feature: gene Location: 3544210-3545268 bp Ori: AUH97542.1 Feature: domain Description: YccC Location: 3544216-3545254 bp Feature: domain Description: YccC Location: 35442 16-35452 54 bp Feature: gene Location: 3545367-3545840 bp Ori: AUH97543.1 Feature: domain Description: PRK10016 Location: 3545370-3545829 bp Feature: domain Description: PRK10016 Location: 3545370-354582 9 bp Feature: gene Location: 3545921-3547405 bp Ori: AUH97544.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3546323-3547013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354632 3-3547013 bp Feature: gene Location: 3547405-3547656 bp Feature: gene Location: 3547924-3549093 bp Ori: AUH97546.1 Feature: domain Description: dacD Location: 3547933-3549088 bp Feature: domain Description: dacD Location: 3547933-3549088 bp Feature: gene Location: 4681698-4681892 bp Feature: gene Location: 4681891-4682322 bp Feature: gene Location: 4682461-4683411 bp Ori: AUH98498.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4682641-4683184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4682 641-4683184 bp Feature: gene Location: 4683389-4683697 bp Ori: AUH98499.1 Feature: domain Description: HTH_XRE Location: 4683401-4683566 bp Feature: domain Description: HTH_XRE Location: 4683401-4683566 bp Feature: gene Location: 4684318-4684758 bp Ori: AUH99354.1 Feature: domain Description: DinI Location: 4684573-4684756 bp Feature: domain Description: DinI Location: 4684573-4684756 bp Feature: gene Location: 4684835-4686319 bp Ori: AUH98500.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685237-4685927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46852 37-468592 7 bp Feature: gene Location: 4686319-4686570 bp Feature: gene Location: 4686785-4689001 bp Ori: AUH99355.1 Feature: domain Description: Phage_GPA Location: 4687202-4688144 bp Feature: domain Description: Phage_GPA Location: 46872 02 -4688144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OafA (COG1835), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YafY (COG2378), PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)
RVT-Retrons, HTH_XRE (smart00530), Phage_GPA (pfam05840)

Seq: CP025516.1 Klebsiella pneumoniae strain 002SK2 plasmid p002SK2_A, complete sequence (159714 bp)
Overview 1 RT 1: 152885-156132 bp Neighborhood of RT #1 [152885, 156146] RVT-GII PRK10276 Feature: gene Location: 152885-153106 bp Feature: gene Location: 153368-153598 bp Feature: gene Location: 153832-155316 bp Ori: AUH99517.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154234-154924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15423 4-154924 bp Feature: gene Location: 155316-155567 bp Feature: gene Location: 155721-156146 bp Ori: AUH99519.1 Feature: domain Description: PRK10276 Location: 155724-156132 bp Feature: domain Description: PRK10276 Location: 155724-15613 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)