myRT

myRT report for GCA_002849695.1_ASM284969v1

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Seq: CP018937.1 Bacteroides fragilis strain Q1F2 chromosome, complete genome (5196111 bp)
Overview 1 RT 1: 641788-645746 bp 2 RT 2: 687081-695991 bp 3 RT 3: 2782901-2786952 bp 4 RT 4: 2998214-3002332 bp Neighborhood of RT #1 [641788, 645746] RVT-UG27 Neighborhood of RT #2 [687081, 695999] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #3 [2782901, 2786952] Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Neighborhood of RT #4 [2998214, 3002337] Bac_Flav_CT_N Bac_Flav_CT_N RVT-GII Intron_maturas2 TraO Feature: gene Location: 641788-642444 bp Feature: gene Location: 642488-643114 bp Feature: gene Location: 643132-644397 bp Ori: AUI45616.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 643321-643957 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 643321 -643957 bp Feature: gene Location: 644720-645217 bp Feature: gene Location: 645267-645746 bp Feature: gene Location: 687081-689270 bp Ori: AUI45673.1 Feature: domain Description: GlnA3 Location: 687153-689268 bp Feature: domain Description: GlnA3 Location: 6871 53-689268 bp Feature: gene Location: 689482-691701 bp Feature: gene Location: 691911-693026 bp Ori: AUI45675.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692226-692778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692226-692778 bp Feature: gene Location: 693168-694961 bp Ori: AUI45676.1 Feature: domain Description: rpsA Location: 693246-694854 bp Feature: domain Description: rpsA Location: 693246-694854 bp Feature: gene Location: 695085-695999 bp Ori: AUI45677.1 Feature: domain Description: RNase_Z Location: 695100-695991 bp Feature: domain Description: RNase_Z Location: 6951 00-695991 bp Feature: gene Location: 2782901-2783326 bp Ori: AUI47268.1 Feature: domain Description: Bac_Flav_CT_N Location: 2782904-2783306 bp Feature: domain Description: Bac_Flav_CT_N Location: 2782904-2783306 bp Feature: gene Location: 2783345-2783832 bp Feature: gene Location: 2783867-2785678 bp Ori: AUI47269.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2784131-2784953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27841 31 -2784953 bp Feature: domain Description: Intron_maturas2 Location: 2785022-2785331 bp Feature: domain Description: Intron_maturas2 Location: 2785022-2785331 bp Feature: gene Location: 2785650-2786375 bp Ori: AUI47270.1 Feature: domain Description: Bac_Flav_CT_N Location: 2785794-2786355 bp Feature: domain Description: Bac_Flav_CT_N Location: 2785794-2786355 bp Feature: gene Location: 2786378-2786952 bp Feature: gene Location: 2998214-2998711 bp Ori: AUI47427.1 Feature: domain Description: Bac_Flav_CT_N Location: 2998217-2998292 bp Feature: domain Description: Bac_Flav_CT_N Location: 299821 7-2998292 bp Feature: domain Description: Bac_Flav_CT_N Location: 2998427-2998691 bp Feature: domain Description: Bac_Flav_CT_N Location: 2998427-2998691 bp Feature: gene Location: 2998730-2999217 bp Feature: gene Location: 2999252-3001063 bp Ori: AUI47428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2999516-3000338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 299951 6-3000338 bp Feature: domain Description: Intron_maturas2 Location: 3000407-3000716 bp Feature: domain Description: Intron_maturas2 Location: 3000407-300071 6 bp Feature: gene Location: 3001035-3001759 bp Feature: gene Location: 3001762-3002337 bp Ori: AUI47429.1 Feature: domain Description: TraO Location: 3001837-3002332 bp Feature: domain Description: TraO Location: 3001 837-3002332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348), TraO (pfam10626)