myRT

myRT report for GCA_002849775.1_ASM284977v1

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Seq: CP023057.1 Glaesserella sp. 15-184 chromosome, complete genome (2384333 bp)
Overview 1 RT 1: 1659875-1670025 bp 2 RT 2: 1738837-1747754 bp 3 RT 3: 2168312-2177132 bp Neighborhood of RT #1 [1659875, 1670027] RVT-UG8 RVT-UG3 PRK05297 TonB-siderophor TonB-siderophor Neighborhood of RT #2 [1738837, 1747834] panK_bact EF-Tu RVT_N RVT-GII GIIM HNHc Sulf_transp SseA KOG1529 SseA Neighborhood of RT #3 [2168312, 2177137] YifE tRNA_U5-meth_tr RVT_N RVT-GII GIIM HNHc EF-Tu EF-G Feature: gene Location: 1659875-1660147 bp Feature: gene Location: 1660559-1661368 bp Feature: gene Location: 1661386-1662501 bp Ori: AUI66489.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1661902-1662346 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 661 902-1 662346 bp Feature: gene Location: 1662494-1663732 bp Ori: AUI66490.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1662770-1663247 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 662770-1 663247 bp Feature: gene Location: 1663870-1667766 bp Ori: AUI66491.1 Feature: domain Description: PRK05297 Location: 1663882-1667761 bp Feature: domain Description: PRK05297 Location: 1 663882-1 667761 bp Feature: gene Location: 1667961-1670027 bp Ori: AUI66492.1 Feature: domain Description: TonB-siderophor Location: 1668102-1669092 bp Feature: domain Description: TonB-siderophor Location: 1 6681 02-1 669092 bp Feature: domain Description: TonB-siderophor Location: 1669122-1670025 bp Feature: domain Description: TonB-siderophor Location: 1 6691 22-1 670025 bp Feature: gene Location: 1738837-1739787 bp Ori: AUI66560.1 Feature: domain Description: panK_bact Location: 1738918-1739785 bp Feature: domain Description: panK_bact Location: 1 73891 8-1 739785 bp Feature: gene Location: 1740657-1741844 bp Ori: AUI66561.1 Gene: tuf Feature: domain Description: EF-Tu Location: 1740660-1741842 bp Feature: domain Description: EF-Tu Location: 1 740660-1 741 842 bp Feature: gene Location: 1743409-1745133 bp Ori: AUI66562.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1743484-1743727 bp Feature: domain Description: RVT_N Location: 1 743484-1 743727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1743772-1744426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 743772-1 744426 bp Feature: domain Description: GIIM Note: maturase Location: 1744480-1744711 bp Feature: domain Description: GIIM Note: maturase Location: 1 744480-1 74471 1 bp Feature: domain Description: HNHc Note: nucleases Location: 1744933-1745095 bp Feature: domain Description: HNHc Note: nucleases Location: 1 744933-1 745095 bp Feature: gene Location: 1745438-1746454 bp Ori: AUI66563.1 Feature: domain Description: Sulf_transp Location: 1745489-1746416 bp Feature: domain Description: Sulf_transp Location: 1 745489-1 74641 6 bp Feature: gene Location: 1746464-1747834 bp Ori: AUI66564.1 Feature: domain Description: SseA Location: 1746524-1746686 bp Feature: domain Description: SseA Location: 1 746524-1 746686 bp Feature: domain Description: KOG1529 Location: 1746695-1746800 bp Feature: domain Description: KOG1 529 Location: 1 746695-1 746800 bp Feature: domain Description: SseA Location: 1746890-1747754 bp Feature: domain Description: SseA Location: 1 746890-1 747754 bp Feature: gene Location: 2168312-2168641 bp Ori: AUI66951.1 Feature: domain Description: YifE Location: 2168315-2168633 bp Feature: domain Description: YifE Location: 21 6831 5-21 68633 bp Feature: gene Location: 2168701-2169795 bp Ori: AUI66952.1 Gene: trmA Feature: domain Description: tRNA_U5-meth_tr Location: 2168722-2169790 bp Feature: domain Description: tRNA_U5-meth_tr Location: 21 68722-21 69790 bp Feature: gene Location: 2170490-2172214 bp Ori: AUI66953.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2170565-2170808 bp Feature: domain Description: RVT_N Location: 21 70565-21 70808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2170853-2171507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 70853-21 71 507 bp Feature: domain Description: GIIM Note: maturase Location: 2171561-2171792 bp Feature: domain Description: GIIM Note: maturase Location: 21 71 561 -21 71 792 bp Feature: domain Description: HNHc Note: nucleases Location: 2172014-2172176 bp Feature: domain Description: HNHc Note: nucleases Location: 21 7201 4-21 721 76 bp Feature: gene Location: 2173779-2174966 bp Ori: AUI66954.1 Gene: tuf Feature: domain Description: EF-Tu Location: 2173782-2174964 bp Feature: domain Description: EF-Tu Location: 21 73782-21 74964 bp Feature: gene Location: 2175035-2177137 bp Ori: AUI66955.1 Gene: fusA Feature: domain Description: EF-G Location: 2175038-2177132 bp Feature: domain Description: EF-G Location: 21 75038-21 771 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, PRK05297 (phosphoribosylformylglycinamidine synthase; Provisional), TonB-siderophor (TIGR01783), panK_bact (TIGR00554), EF-Tu (TIGR00485), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)
Sulf_transp (pfam04143), SseA (COG2897), KOG1529 (KOG1529, Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase ), YifE (COG3085), tRNA_U5-meth_tr (pfam05958), EF-G (TIGR00484)