myRT

myRT report for GCA_002849835.1_ASM284983v1

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Seq: CP018622.1 Virgibacillus dokdonensis strain 21D chromosome, complete genome (4263520 bp)
Overview 1 RT 1: 643307-648663 bp 2 RT 2: 752414-757183 bp 3 RT 3: 2840416-2849633 bp Neighborhood of RT #1 [643307, 648677] ectoine_ehuA YjzC RVT-GII GIIM murB DUF915 Neighborhood of RT #2 [752414, 757183] BaeS OmpR RVT-GII GIIM RVT-GII InsE Neighborhood of RT #3 [2840416, 2849641] sucA PRK05704 RVT-GII GIIM NupC PRK01766 Feature: gene Location: 643307-644077 bp Ori: AUJ23726.1 Gene: artM_2 Feature: domain Description: ectoine_ehuA Location: 643325-644069 bp Feature: domain Description: ectoine_ehuA Location: 643325-644069 bp Feature: gene Location: 644645-644857 bp Ori: AUJ23727.1 Feature: domain Description: YjzC Location: 644648-644807 bp Feature: domain Description: YjzC Location: 644648-644807 bp Feature: gene Location: 645035-646423 bp Ori: AUJ23728.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645356-645971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 645356-645971 bp Feature: domain Description: GIIM Note: maturase Location: 646031-646244 bp Feature: domain Description: GIIM Note: maturase Location: 646031 -646244 bp Feature: gene Location: 646900-647820 bp Ori: AUJ23729.1 Gene: murB Feature: domain Description: murB Location: 646912-647818 bp Feature: domain Description: murB Location: 64691 2-64781 8 bp Feature: gene Location: 647865-648677 bp Ori: AUJ23730.1 Feature: domain Description: DUF915 Location: 647961-648663 bp Feature: domain Description: DUF91 5 Location: 647961 -648663 bp Feature: gene Location: 752414-753448 bp Ori: AUJ23825.1 Gene: phoR_1 Feature: domain Description: BaeS Location: 752546-753446 bp Feature: domain Description: BaeS Location: 752546-753446 bp Feature: gene Location: 753498-754193 bp Ori: AUJ23826.1 Gene: yycF_1 Feature: domain Description: OmpR Location: 753513-754188 bp Feature: domain Description: OmpR Location: 75351 3-7541 88 bp Feature: gene Location: 754612-755478 bp Ori: AUJ23827.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754615-755098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75461 5-755098 bp Feature: domain Description: GIIM Note: maturase Location: 755170-755380 bp Feature: domain Description: GIIM Note: maturase Location: 7551 70-755380 bp Feature: gene Location: 755462-755734 bp Ori: AUJ23828.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755573-755699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755573-755699 bp Feature: gene Location: 755737-756018 bp Ori: AUJ23829.1 Feature: domain Description: InsE Location: 755740-756010 bp Feature: domain Description: InsE Location: 755740-75601 0 bp Feature: gene Location: 757028-757183 bp Feature: gene Location: 2840416-2843271 bp Ori: AUJ25663.1 Gene: odhA Feature: domain Description: sucA Location: 2840437-2843239 bp Feature: domain Description: sucA Location: 2840437-2843239 bp Feature: gene Location: 2843264-2844526 bp Ori: AUJ25664.1 Gene: odhB Feature: domain Description: PRK05704 Location: 2843267-2844521 bp Feature: domain Description: PRK05704 Location: 2843267-2844521 bp Feature: gene Location: 2845010-2846398 bp Ori: AUJ25665.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2845331-2845946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2845331 -2845946 bp Feature: domain Description: GIIM Note: maturase Location: 2846006-2846219 bp Feature: domain Description: GIIM Note: maturase Location: 2846006-284621 9 bp Feature: gene Location: 2846899-2848086 bp Ori: AUJ25666.1 Gene: nupC Feature: domain Description: NupC Location: 2846905-2848084 bp Feature: domain Description: NupC Location: 2846905-2848084 bp Feature: gene Location: 2848283-2849641 bp Ori: AUJ25667.1 Gene: norM_2 Feature: domain Description: PRK01766 Location: 2848289-2849633 bp Feature: domain Description: PRK01 766 Location: 2848289-2849633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ectoine_ehuA (TIGR03005), YjzC (pfam14168), RVT-GII, GIIM (pfam08388), murB (TIGR00179), DUF915 (pfam06028), BaeS (COG0642), OmpR (COG0745), InsE (COG2963), sucA (PRK09404)
PRK05704 (2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase), NupC (COG1972), PRK01766 (multidrug efflux protein; Reviewed)