myRT

myRT report for GCA_002849955.1_ASM284995v1

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Seq: CP015498.1 Lactobacillus helveticus strain FAM22155 chromosome, complete genome (2191149 bp)
Overview 1 RT 1: 1173106-1177675 bp 2 RT 2: 1854018-1859862 bp Neighborhood of RT #1 [1173106, 1177675] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM SunT Neighborhood of RT #2 [1854018, 1859862] Abi_2 GlpR RVT-AbiK Transposase_mut Feature: gene Location: 1173106-1173336 bp Ori: AUI77144.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1173205-1173298 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 1 73205-1 1 73298 bp Feature: gene Location: 1173311-1174648 bp Ori: AUI76300.1 Feature: domain Description: zf-IS66 Location: 1173449-1173575 bp Feature: domain Description: zf-IS66 Location: 1 1 73449-1 1 73575 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1173641-1174475 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 73641 -1 1 74475 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1174496-1174619 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 74496-1 1 7461 9 bp Feature: gene Location: 1174695-1175570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1174722-1175091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 74722-1 1 75091 bp Feature: domain Description: GIIM Note: maturase Location: 1175148-1175355 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 751 48-1 1 75355 bp Feature: gene Location: 1175708-1177294 bp Ori: AUI76301.1 Feature: domain Description: SunT Location: 1175750-1177289 bp Feature: domain Description: SunT Location: 1 1 75750-1 1 77289 bp Feature: gene Location: 1177295-1177675 bp Feature: gene Location: 1854018-1855013 bp Ori: AUI76832.1 Feature: domain Description: Abi_2 Location: 1854129-1854738 bp Feature: domain Description: Abi_2 Location: 1 8541 29-1 854738 bp Feature: gene Location: 1855583-1855828 bp Ori: AUI76833.1 Feature: domain Description: GlpR Location: 1855592-1855796 bp Feature: domain Description: GlpR Location: 1 855592-1 855796 bp Feature: gene Location: 1856458-1858044 bp Ori: AUI76834.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1856563-1856953 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 856563-1 856953 bp Feature: gene Location: 1858125-1859303 bp Ori: AUI76835.1 Feature: domain Description: Transposase_mut Location: 1858155-1859238 bp Feature: domain Description: Transposase_mut Location: 1 8581 55-1 859238 bp Feature: gene Location: 1859425-1859862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), SunT (COG2274), Abi_2 (pfam07751), GlpR (COG1349), RVT-AbiK
Transposase_mut (pfam00872)