myRT

myRT report for GCA_002850295.1_ASM285029v1

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Seq: CP025537.1 Vibrio harveyi strain 345 chromosome 1, complete sequence (3713225 bp)
Overview 1 RT 1: 2954613-2957416 bp Neighborhood of RT #1 [2954613, 2957416] PRK11175 Avd_like RVT-DGRs DUF823 Feature: gene Location: 2954613-2955263 bp Feature: domain Description: PRK11175 Location: 2954616-2955246 bp Feature: domain Description: PRK1 1 1 75 Location: 295461 6-2955246 bp Feature: gene Location: 2955464-2955832 bp Ori: AWB00433.1 Feature: domain Description: Avd_like Location: 2955470-2955773 bp Feature: domain Description: Avd_like Location: 2955470-2955773 bp Feature: gene Location: 2955860-2957164 bp Ori: AWB00434.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2956064-2956826 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2956064-2956826 bp Feature: gene Location: 2957107-2957292 bp Ori: AWB00435.1 Feature: domain Description: DUF823 Location: 2957122-2957251 bp Feature: domain Description: DUF823 Location: 29571 22-2957251 bp Feature: gene Location: 2957234-2957416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11175 (universal stress protein UspE; Provisional), Avd_like (cd16376), RVT-DGRs, DUF823 (pfam05689)

Seq: CP025538.1 Vibrio harveyi strain 345 chromosome 2, complete sequence (2220396 bp)
Overview 1 RT 1: 140425-153529 bp Neighborhood of RT #1 [140425, 154542] DM13 DUF11 DUF11 DUF11 DUF11 B_ant_repeat DUF11 DUF11 B_ant_repeat DUF11 RVT_N RVT-GII GIIM DUF11 DUF11 DUF11 DUF11 DUF11 DUF11 DUF11 DUF11 DUF11 DUF11 Feature: gene Location: 140425-140916 bp Ori: AWB01266.1 Feature: domain Description: DM13 Location: 140602-140887 bp Feature: domain Description: DM13 Location: 140602 -140887 bp Feature: gene Location: 141288-145655 bp Feature: domain Description: DUF11 Location: 141588-141879 bp Feature: domain Description: DUF11 Location: 141588-141879 bp Feature: domain Description: DUF11 Location: 142017-142338 bp Feature: domain Description: DUF11 Location: 142 017-142 338 bp Feature: domain Description: DUF11 Location: 142470-142809 bp Feature: domain Description: DUF11 Location: 142 470-142 809 bp Feature: domain Description: DUF11 Location: 142902-143187 bp Feature: domain Description: DUF11 Location: 142 902 -143187 bp Feature: domain Description: B_ant_repeat Location: 143385-143475 bp Feature: domain Description: B_ant_repeat Location: 143385-143475 bp Feature: domain Description: DUF11 Location: 143826-144018 bp Feature: domain Description: DUF11 Location: 14382 6-144018 bp Feature: domain Description: DUF11 Location: 144261-144597 bp Feature: domain Description: DUF11 Location: 1442 61-144597 bp Feature: domain Description: B_ant_repeat Location: 144774-144822 bp Feature: domain Description: B_ant_repeat Location: 144774-14482 2 bp Feature: domain Description: DUF11 Location: 145152-145482 bp Feature: domain Description: DUF11 Location: 145152 -145482 bp Feature: gene Location: 146234-147706 bp Ori: AWB03000.1 Gene: ltrA Feature: domain Description: RVT_N Location: 146282-146525 bp Feature: domain Description: RVT_N Location: 1462 82 -14652 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146570-147197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146570-147197 bp Feature: domain Description: GIIM Note: maturase Location: 147263-147482 bp Feature: domain Description: GIIM Note: maturase Location: 1472 63-147482 bp Feature: gene Location: 147634-147819 bp Feature: gene Location: 147820-154542 bp Feature: domain Description: DUF11 Location: 148687-148864 bp Feature: domain Description: DUF11 Location: 148687-148864 bp Feature: domain Description: DUF11 Location: 149161-149461 bp Feature: domain Description: DUF11 Location: 149161-149461 bp Feature: domain Description: DUF11 Location: 150016-150307 bp Feature: domain Description: DUF11 Location: 150016-150307 bp Feature: domain Description: DUF11 Location: 150427-150619 bp Feature: domain Description: DUF11 Location: 15042 7-150619 bp Feature: domain Description: DUF11 Location: 151246-151579 bp Feature: domain Description: DUF11 Location: 1512 46-151579 bp Feature: domain Description: DUF11 Location: 151654-151981 bp Feature: domain Description: DUF11 Location: 151654-151981 bp Feature: domain Description: DUF11 Location: 152062-152260 bp Feature: domain Description: DUF11 Location: 152 062 -152 2 60 bp Feature: domain Description: DUF11 Location: 152470-152656 bp Feature: domain Description: DUF11 Location: 152 470-152 656 bp Feature: domain Description: DUF11 Location: 152890-153289 bp Feature: domain Description: DUF11 Location: 152 890-1532 89 bp Feature: domain Description: DUF11 Location: 153307-153529 bp Feature: domain Description: DUF11 Location: 153307-15352 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DM13 (smart00686), DUF11 (pfam01345), B_ant_repeat (TIGR01451), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)