myRT

myRT report for GCA_002852945.2_ASM285294v2

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Seq: CP028782.1 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020046 plasmid pQnrB52_020046, complete sequence (74017 bp)
Overview 1 RT 1: 2978-6467 bp Neighborhood of RT #1 [2978, 6467] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 2978-3666 bp Feature: domain Description: InsE Location: 2987-3272 bp Feature: domain Description: InsE Location: 2987-3272 bp Feature: gene Location: 3593-4030 bp Feature: gene Location: 4324-5847 bp Ori: AWA49695.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4597-5329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4597-5329 bp Feature: domain Description: GIIM Note: maturase Location: 5404-5602 bp Feature: domain Description: GIIM Note: maturase Location: 5404-5602 bp Feature: gene Location: 5928-6107 bp Feature: domain Description: PHA02517 Location: 5931-6108 bp Feature: domain Description: PHA0251 7 Location: 5931 -61 08 bp Feature: gene Location: 6255-6467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP028781.1 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020046 plasmid pNDM5_020046, complete sequence (159394 bp)
Overview 1 RT 1: 148801-152269 bp Neighborhood of RT #1 [148801, 152283] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 148801-149109 bp Feature: domain Description: Rep_3 Location: 148807-149071 bp Feature: domain Description: Rep_3 Location: 148807-149071 bp Feature: gene Location: 149119-149816 bp Feature: domain Description: Zn_Tnp_IS1 Location: 149125-149227 bp Feature: domain Description: Zn_Tnp_IS1 Location: 14912 5-1492 2 7 bp Feature: domain Description: HTH_Tnp_IS1 Location: 149248-149380 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1492 48-149380 bp Feature: gene Location: 149968-151452 bp Ori: AWA49672.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150370-151060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150370-151060 bp Feature: gene Location: 151452-151703 bp Feature: gene Location: 151858-152283 bp Ori: AWA49674.1 Feature: domain Description: PRK10276 Location: 151861-152269 bp Feature: domain Description: PRK102 76 Location: 151861-152 2 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP028783.1 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020046 chromosome, complete genome (5413765 bp)
Overview 1 RT 1: 1813258-1818130 bp 2 RT 2: 2997310-3001448 bp 3 RT 3: 3179303-3183402 bp 4 RT 4: 3521446-3526284 bp 5 RT 5: 3964859-3967639 bp 6 RT 6: 4397879-4402583 bp Neighborhood of RT #1 [1813258, 1818144] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [2997310, 3001448] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3179303, 3183413] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [3521446, 3526334] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #5 [3964859, 3967639] PRK10276 PRK10276 RVT-GII Neighborhood of RT #6 [4397879, 4402591] InsE RVT-GII GIIM PHA02517 PRK10902 Feature: gene Location: 1813258-1814427 bp Ori: AWA51453.1 Feature: domain Description: dacD Location: 1813267-1814422 bp Feature: domain Description: dacD Location: 1813 267-1814422 bp Feature: gene Location: 1814697-1814948 bp Feature: gene Location: 1814948-1816432 bp Ori: AWA51455.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1815350-1816040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18153 50-1816040 bp Feature: gene Location: 1816514-1816987 bp Ori: AWA51456.1 Feature: domain Description: PRK10016 Location: 1816517-1816976 bp Feature: domain Description: PRK10016 Location: 1816517-1816976 bp Feature: gene Location: 1817086-1818144 bp Ori: AWA51457.1 Feature: domain Description: YccC Location: 1817092-1818130 bp Feature: domain Description: YccC Location: 1817092-181813 0 bp Feature: gene Location: 2997310-2998575 bp Ori: AWA52556.1 Feature: domain Description: umuC Location: 2997313-2998573 bp Feature: domain Description: umuC Location: 29973 13 -2998573 bp Feature: gene Location: 2998577-2998996 bp Ori: AWA52557.1 Feature: domain Description: PRK10276 Location: 2998580-2998991 bp Feature: domain Description: PRK10276 Location: 2998580-2998991 bp Feature: gene Location: 2999076-3000560 bp Ori: AWA52558.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2999478-3000168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2999478-3 000168 bp Feature: gene Location: 3000560-3000811 bp Feature: gene Location: 3001359-3001448 bp Feature: gene Location: 3179303-3180568 bp Ori: AWA52740.1 Feature: domain Description: umuC Location: 3179306-3180566 bp Feature: domain Description: umuC Location: 3 1793 06-3 180566 bp Feature: gene Location: 3180571-3180990 bp Ori: AWA52741.1 Feature: domain Description: PRK10276 Location: 3180574-3180985 bp Feature: domain Description: PRK10276 Location: 3 180574-3 180985 bp Feature: gene Location: 3181069-3182553 bp Ori: AWA52742.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3181471-3182161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 181471-3 182161 bp Feature: gene Location: 3182553-3182804 bp Feature: gene Location: 3183171-3183413 bp Ori: AWA52744.1 Feature: domain Description: DinI Location: 3183222-3183402 bp Feature: domain Description: DinI Location: 3 183 222-3 183 402 bp Feature: gene Location: 3521446-3522324 bp Ori: AWA53059.1 Feature: domain Description: Phage_CI_repr Location: 3521473-3521656 bp Feature: domain Description: Phage_CI_repr Location: 3 521473 -3 521656 bp Feature: domain Description: Phage_CI_repr Location: 3521785-3521977 bp Feature: domain Description: Phage_CI_repr Location: 3 521785-3 521977 bp Feature: domain Description: Phage_CI_C Location: 3522004-3522298 bp Feature: domain Description: Phage_CI_C Location: 3 522004-3 522298 bp Feature: gene Location: 3522336-3523280 bp Feature: gene Location: 3523379-3524863 bp Ori: AWA53061.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3523781-3524471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 523 781-3 524471 bp Feature: gene Location: 3524863-3525114 bp Feature: gene Location: 3525282-3526334 bp Ori: AWA53063.1 Feature: domain Description: int Location: 3525285-3526284 bp Feature: domain Description: int Location: 3 525285-3 526284 bp Feature: gene Location: 3964859-3965176 bp Ori: AWA53451.1 Feature: domain Description: PRK10276 Location: 3964865-3964979 bp Feature: domain Description: PRK10276 Location: 3 964865-3 964979 bp Feature: domain Description: PRK10276 Location: 3965006-3965075 bp Feature: domain Description: PRK10276 Location: 3 965006-3 965075 bp Feature: gene Location: 3965176-3965415 bp Feature: gene Location: 3965493-3966977 bp Ori: AWA53453.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3965895-3966585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 965895-3 966585 bp Feature: gene Location: 3966977-3967228 bp Feature: gene Location: 3967430-3967639 bp Feature: gene Location: 4397879-4398594 bp Feature: domain Description: InsE Location: 4397903-4398188 bp Feature: domain Description: InsE Location: 43 97903 -43 98188 bp Feature: gene Location: 4398536-4398958 bp Feature: gene Location: 4399252-4400775 bp Ori: AWA53862.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4399525-4400257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 99525-4400257 bp Feature: domain Description: GIIM Note: maturase Location: 4400332-4400530 bp Feature: domain Description: GIIM Note: maturase Location: 44003 3 2-440053 0 bp Feature: gene Location: 4400856-4401341 bp Feature: domain Description: PHA02517 Location: 4400862-4401303 bp Feature: domain Description: PHA02517 Location: 4400862-44013 03 bp Feature: gene Location: 4401374-4402591 bp Ori: AWA53863.1 Feature: domain Description: PRK10902 Location: 4401932-4402583 bp Feature: domain Description: PRK10902 Location: 440193 2-4402583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)
InsE (COG2963), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10902 (FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional)