myRT

myRT report for GCA_002853475.2_ASM285347v2

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Seq: CP037963.1 Klebsiella pneumoniae strain SCKP020135 chromosome, complete genome (5205214 bp)
Overview 1 RT 1: 3099239-3102070 bp Neighborhood of RT #1 [3099239, 3102081] PRK10276 RVT-GII DinI Feature: gene Location: 3099239-3099658 bp Ori: QBP82208.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3099242-3099653 bp Feature: domain Description: PRK1 0276 Location: 3099242-3099653 bp Feature: gene Location: 3099636-3099821 bp Feature: gene Location: 3099737-3101221 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100139-3100829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 001 39-31 00829 bp Feature: gene Location: 3101221-3101472 bp Feature: gene Location: 3101839-3102081 bp Ori: QBP82211.1 Feature: domain Description: DinI Location: 3101890-3102070 bp Feature: domain Description: DinI Location: 31 01 890-31 02070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183)

Seq: CP037966.1 Klebsiella pneumoniae strain SCKP020135 plasmid p1_020135, complete sequence (179816 bp)
Overview 1 RT 1: 170040-173121 bp Neighborhood of RT #1 [170040, 173135] DUF1472 RVT-GII PRK10276 Feature: gene Location: 170040-170132 bp Feature: domain Description: DUF1472 Location: 170052-170118 bp Feature: domain Description: DUF1472 Location: 170052 -170118 bp Feature: gene Location: 170356-170586 bp Feature: gene Location: 170820-172304 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171222-171912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1712 2 2 -171912 bp Feature: gene Location: 172304-172555 bp Feature: gene Location: 172710-173135 bp Ori: QBP84673.1 Gene: umuD Feature: domain Description: PRK10276 Location: 172713-173121 bp Feature: domain Description: PRK102 76 Location: 172 713-17312 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP037964.1 Klebsiella pneumoniae strain SCKP020135 plasmid pMCR8_020135, complete sequence (131811 bp)
Overview 1 RT 1: 49568-53040 bp Neighborhood of RT #1 [49568, 53057] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 49568-49876 bp Feature: domain Description: Rep_3 Location: 49574-49838 bp Feature: domain Description: Rep_3 Location: 49574-4983 8 bp Feature: gene Location: 49886-50583 bp Feature: domain Description: Zn_Tnp_IS1 Location: 49892-49994 bp Feature: domain Description: Zn_Tnp_IS1 Location: 49892-49994 bp Feature: domain Description: HTH_Tnp_IS1 Location: 50015-50147 bp Feature: domain Description: HTH_Tnp_IS1 Location: 50015-50147 bp Feature: gene Location: 50735-52217 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51137-51548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5113 7-51548 bp Feature: gene Location: 52217-52468 bp Feature: gene Location: 52626-53057 bp Ori: QBP84348.1 Gene: umuD Feature: domain Description: PRK10276 Location: 52677-53040 bp Feature: domain Description: PRK10276 Location: 52677-53 040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)