myRT

myRT report for GCA_002853805.1_ASM285380v1

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Seq: CP024145.1 Escherichia coli strain 14EC029 plasmid p14EC029d, complete sequence (106478 bp)
Overview 1 RT 1: 12715-16512 bp Neighborhood of RT #1 [12715, 16512] RVT_N RVT-GII GIIM HNHc PRK13699 Feature: gene Location: 12715-12819 bp Feature: gene Location: 12823-13127 bp Feature: gene Location: 13357-15057 bp Ori: AUK04169.1 Gene: ltrA Feature: domain Description: RVT_N Location: 13411-13654 bp Feature: domain Description: RVT_N Location: 1 341 1 -1 3654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13699-14335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3699-1 4335 bp Feature: domain Description: GIIM Note: maturase Location: 14386-14620 bp Feature: domain Description: GIIM Note: maturase Location: 1 4386-1 4620 bp Feature: domain Description: HNHc Note: nucleases Location: 14851-15001 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4851 -1 5001 bp Feature: gene Location: 15637-16290 bp Ori: AUK04170.1 Feature: domain Description: PRK13699 Location: 15682-16288 bp Feature: domain Description: PRK1 3699 Location: 1 5682-1 6288 bp Feature: gene Location: 16291-16512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13699 (putative methylase; Provisional)

Seq: CP024141.1 Escherichia coli strain 14EC029 chromosome, complete genome (4981062 bp)
Overview 1 RT 1: 107477-111356 bp Neighborhood of RT #1 [107477, 111361] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 107477-108193 bp Ori: AUJ99022.1 Feature: domain Description: rph Location: 107480-108188 bp Feature: domain Description: rph Location: 107480-108188 bp Feature: gene Location: 108259-108900 bp Ori: AUJ99023.1 Feature: domain Description: pyrE Location: 108262-108895 bp Feature: domain Description: pyrE Location: 1082 62 -108895 bp Feature: gene Location: 109198-110157 bp Ori: AUJ99024.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109333-109882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109333-109882 bp Feature: gene Location: 110203-110799 bp Ori: AUJ99025.1 Feature: domain Description: slmA Location: 110209-110785 bp Feature: domain Description: slmA Location: 1102 09-110785 bp Feature: gene Location: 110906-111361 bp Ori: AUK03537.1 Feature: domain Description: dut Location: 110909-111356 bp Feature: domain Description: dut Location: 110909-111356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)