myRT

myRT report for GCA_002860085.1_ASM286008v1

Download annotations/find similar RTs

Seq: CP019051.1 Escherichia coli strain CRE1540 chromosome, complete genome (4942719 bp)
Overview 1 RT 1: 312135-318039 bp 2 RT 2: 2919374-2921102 bp Neighborhood of RT #1 [312135, 318155] Psu RVT-UG7 PRK09692 Phage_int_SAM_5 INT_C_like_1 Neighborhood of RT #2 [2919374, 2921102] COG4930 PHA02517 RVT-GII Feature: gene Location: 312135-312707 bp Ori: AUL66939.1 Feature: domain Description: Psu Location: 312153-312690 bp Feature: domain Description: Psu Location: 31 21 53-31 2690 bp Feature: gene Location: 313010-313750 bp Feature: gene Location: 313747-315375 bp Ori: AUL66941.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 314155-314584 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 31 41 55-31 4584 bp Feature: gene Location: 315368-316552 bp Ori: AUL66942.1 Feature: domain Description: PRK09692 Location: 315374-316529 bp Feature: domain Description: PRK09692 Location: 31 5374-31 6529 bp Feature: gene Location: 316878-318155 bp Ori: AUL66943.1 Feature: domain Description: Phage_int_SAM_5 Location: 317190-317427 bp Feature: domain Description: Phage_int_SAM_5 Location: 31 71 90-31 7427 bp Feature: domain Description: INT_C_like_1 Location: 317523-318039 bp Feature: domain Description: INT_C_like_1 Location: 31 7523-31 8039 bp Feature: gene Location: 2919374-2919703 bp Feature: domain Description: COG4930 Location: 2919377-2919701 bp Feature: domain Description: COG4930 Location: 291 9377-291 9701 bp Feature: gene Location: 2919707-2920321 bp Ori: AUL69374.1 Feature: domain Description: PHA02517 Location: 2919761-2920310 bp Feature: domain Description: PHA0251 7 Location: 291 9761 -292031 0 bp Feature: gene Location: 2920254-2920664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920257-2920614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920257-292061 4 bp Feature: gene Location: 2920722-2920856 bp Feature: gene Location: 2920911-2921102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184), COG4930 (Predicted ATP-dependent Lon-type protease ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII