myRT

myRT report for GCA_002886045.1_ASM288604v1

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Seq: CP025791.1 Flavivirga eckloniae strain ECD14 chromosome, complete genome (5665358 bp)
Overview 1 RT 1: 4010975-4020018 bp 2 RT 2: 4058767-4067034 bp Neighborhood of RT #1 [4010975, 4020026] WGR_DNA_ligase RVT-Retrons SCAD_SBCAD anmK Neighborhood of RT #2 [4058767, 4067034] HAD_BPGM_like LpqC Por_Secre_tail RVT-UG5 Lipase_3 Feature: gene Location: 4010975-4014085 bp Ori: AUP80240.1 Feature: domain Description: WGR_DNA_ligase Location: 4011059-4011275 bp Feature: domain Description: WGR_DNA_ligase Location: 401 1 059-401 1 275 bp Feature: gene Location: 4014093-4015721 bp Feature: gene Location: 4015981-4017483 bp Ori: AUP80242.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4016530-4017145 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401 6530-401 71 45 bp Feature: gene Location: 4017725-4018867 bp Ori: AUP80243.1 Feature: domain Description: SCAD_SBCAD Location: 4017746-4018859 bp Feature: domain Description: SCAD_SBCAD Location: 401 7746-401 8859 bp Feature: gene Location: 4018962-4020026 bp Ori: AUP80244.1 Feature: domain Description: anmK Location: 4018983-4020018 bp Feature: domain Description: anmK Location: 401 8983-402001 8 bp Feature: gene Location: 4058767-4059402 bp Ori: AUP80271.1 Feature: domain Description: HAD_BPGM_like Location: 4058782-4059325 bp Feature: domain Description: HAD_BPGM_like Location: 4058782-4059325 bp Feature: gene Location: 4059561-4060694 bp Ori: AUP80272.1 Feature: domain Description: LpqC Location: 4059609-4060233 bp Feature: domain Description: LpqC Location: 4059609-4060233 bp Feature: domain Description: Por_Secre_tail Location: 4060491-4060689 bp Feature: domain Description: Por_Secre_tail Location: 4060491 -4060689 bp Feature: gene Location: 4061171-4064326 bp Ori: AUP80273.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4061735-4062236 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4061 735-4062236 bp Feature: gene Location: 4064898-4066064 bp Ori: AUP80274.1 Feature: domain Description: Lipase_3 Location: 4065129-4065999 bp Feature: domain Description: Lipase_3 Location: 40651 29-4065999 bp Feature: gene Location: 4066621-4067034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, SCAD_SBCAD (cd01158), anmK (PRK09585), HAD_BPGM_like (cd07526), LpqC (COG3509), Por_Secre_tail (TIGR04183), RVT-UG5, Lipase_3 (pfam01764)