myRT

myRT report for GCA_002887655.1_ASM288765v1

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Seq: CP025796.1 Vibrio owensii strain 051011B chromosome 1, complete sequence (3797023 bp)
Overview 1 RT 1: 1079739-1084553 bp 2 RT 2: 3491822-3498488 bp Neighborhood of RT #1 [1079739, 1084553] RVT-Retrons Neighborhood of RT #2 [3491822, 3498488] DEXQc_UvrD DEXQc_UvrD UvrD_C YbjD RVT_N RVT-GII GIIM Feature: gene Location: 1079739-1079909 bp Feature: gene Location: 1080397-1082100 bp Feature: gene Location: 1082197-1083162 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1082428-1082968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 082428-1 082968 bp Feature: gene Location: 1083314-1084060 bp Feature: gene Location: 1084053-1084553 bp Feature: gene Location: 3491822-3493579 bp Feature: domain Description: DEXQc_UvrD Location: 3491843-3492107 bp Feature: domain Description: DEXQc_UvrD Location: 3491 843-34921 07 bp Feature: domain Description: DEXQc_UvrD Location: 3492335-3492689 bp Feature: domain Description: DEXQc_UvrD Location: 3492335-3492689 bp Feature: domain Description: UvrD_C Location: 3493349-3493514 bp Feature: domain Description: UvrD_C Location: 3493349-349351 4 bp Feature: gene Location: 3493576-3495525 bp Feature: domain Description: YbjD Location: 3493579-3495097 bp Feature: domain Description: YbjD Location: 3493579-3495097 bp Feature: gene Location: 3496340-3497812 bp Feature: domain Description: RVT_N Location: 3496388-3496631 bp Feature: domain Description: RVT_N Location: 3496388-3496631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3496676-3497303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3496676-3497303 bp Feature: domain Description: GIIM Note: maturase Location: 3497363-3497588 bp Feature: domain Description: GIIM Note: maturase Location: 3497363-3497588 bp Feature: gene Location: 3498001-3498186 bp Feature: gene Location: 3498264-3498488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DEXQc_UvrD (cd17932), UvrD_C (pfam13361), YbjD (COG3593), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CP025797.1 Vibrio owensii strain 051011B chromosome 2, complete sequence (2367538 bp)
Overview 1 RT 1: 741460-747825 bp 2 RT 2: 1918452-1925866 bp Neighborhood of RT #1 [741460, 747825] DUF1800 BKR_SDR_c RVT_N RVT-GII GIIM DUF1176 Neighborhood of RT #2 [1918452, 1925866] SR_Res_par HTH_Hin_like RVT-UG15 Feature: gene Location: 741460-742944 bp Feature: domain Description: DUF1800 Location: 741493-742933 bp Feature: domain Description: DUF1800 Location: 741493-742 933 bp Feature: gene Location: 743385-744104 bp Feature: domain Description: BKR_SDR_c Location: 743400-744099 bp Feature: domain Description: BKR_SDR_c Location: 743400-744099 bp Feature: gene Location: 744308-745810 bp Feature: domain Description: RVT_N Location: 744386-744629 bp Feature: domain Description: RVT_N Location: 744386-74462 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744674-745301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744674-745301 bp Feature: domain Description: GIIM Note: maturase Location: 745361-745586 bp Feature: domain Description: GIIM Note: maturase Location: 745361-745586 bp Feature: gene Location: 746512-747519 bp Feature: domain Description: DUF1176 Location: 746590-747487 bp Feature: domain Description: DUF1176 Location: 746590-747487 bp Feature: gene Location: 747682-747825 bp Feature: gene Location: 1918452-1918658 bp Feature: gene Location: 1918821-1919444 bp Feature: domain Description: SR_Res_par Location: 1918830-1919268 bp Feature: domain Description: SR_Res_par Location: 1918830-19192 68 bp Feature: domain Description: HTH_Hin_like Location: 1919304-1919430 bp Feature: domain Description: HTH_Hin_like Location: 1919304-1919430 bp Feature: gene Location: 1919500-1921101 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1919911-1920313 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1919911-192 0313 bp Feature: gene Location: 1921259-1922299 bp Feature: gene Location: 1922531-1925866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1800 (pfam08811), BKR_SDR_c (cd05333), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF1176 (pfam06674), SR_Res_par (cd03767), HTH_Hin_like (cd00569), RVT-UG15