myRT

myRT report for GCA_002891475.1_ASM289147v1

Download annotations/find similar RTs

Seq: CP025933.1 Morganella morganii strain KC-Tt-01 chromosome, complete genome (3824890 bp)
Overview 1 RT 1: 2257354-2262696 bp 2 RT 2: 2919049-2923319 bp 3 RT 3: 3347917-3357939 bp Neighborhood of RT #1 [2257354, 2262761] PRK10086 PRK09692 RVT-Retrons Ogr_Delta Neighborhood of RT #2 [2919049, 2923321] HTH_Tnp_1 RVT-Retrons HTH_XRE DinI Neighborhood of RT #3 [3347917, 3357971] YeeA RVT-UG5 nitrilase YeeA TIGR02687 Feature: gene Location: 2257354-2258319 bp Ori: AUR31889.1 Feature: domain Description: PRK10086 Location: 2257399-2258308 bp Feature: domain Description: PRK1 0086 Location: 2257399-2258308 bp Feature: gene Location: 2258750-2259931 bp Ori: AUR31890.1 Feature: domain Description: PRK09692 Location: 2258759-2259902 bp Feature: domain Description: PRK09692 Location: 2258759-2259902 bp Feature: gene Location: 2259915-2260847 bp Ori: AUR31891.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2260017-2260611 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226001 7-226061 1 bp Feature: gene Location: 2260849-2261814 bp Feature: gene Location: 2262537-2262761 bp Ori: AUR31892.1 Feature: domain Description: Ogr_Delta Location: 2262561-2262696 bp Feature: domain Description: Ogr_Delta Location: 2262561 -2262696 bp Feature: gene Location: 2919049-2919696 bp Feature: gene Location: 2919998-2921105 bp Feature: domain Description: HTH_Tnp_1 Location: 2920004-2920211 bp Feature: domain Description: HTH_Tnp_1 Location: 2920004-292021 1 bp Feature: gene Location: 2921347-2922297 bp Ori: AUR32497.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2921527-2922070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2921 527-2922070 bp Feature: gene Location: 2922275-2922583 bp Ori: AUR32498.1 Feature: domain Description: HTH_XRE Location: 2922287-2922452 bp Feature: domain Description: HTH_XRE Location: 2922287-2922452 bp Feature: gene Location: 2923202-2923321 bp Feature: domain Description: DinI Location: 2923208-2923319 bp Feature: domain Description: DinI Location: 2923208-292331 9 bp Feature: gene Location: 3347917-3349851 bp Ori: AUR32855.1 Feature: domain Description: YeeA Location: 3348556-3349747 bp Feature: domain Description: YeeA Location: 3348556-3349747 bp Feature: gene Location: 3349799-3350338 bp Feature: gene Location: 3350355-3353354 bp Ori: AUR32857.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3350817-3351306 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 335081 7-3351 306 bp Feature: domain Description: nitrilase Location: 3352542-3353259 bp Feature: domain Description: nitrilase Location: 3352542-3353259 bp Feature: gene Location: 3353357-3355150 bp Ori: AUR32858.1 Feature: domain Description: YeeA Location: 3353390-3355082 bp Feature: domain Description: YeeA Location: 3353390-3355082 bp Feature: gene Location: 3355368-3357971 bp Ori: AUR32859.1 Feature: domain Description: TIGR02687 Location: 3355386-3357939 bp Feature: domain Description: TIGR02687 Location: 3355386-3357939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10086 (DNA-binding transcriptional regulator DsdC), PRK09692 (Integrase; provisional), RVT-Retrons, Ogr_Delta (pfam04606), HTH_Tnp_1 (pfam01527), HTH_XRE (smart00530), DinI (pfam06183), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)
TIGR02687 (TIGR02687 family protein)