myRT

myRT report for GCA_002892535.1_ASM289253v1

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Seq: CP024847.1 Neisseriaceae bacterium DSM 100970 chromosome, complete genome (2820660 bp)
Overview 1 RT 1: 28131-30165 bp 2 RT 2: 2177173-2180235 bp 3 RT 3: 2410568-2417620 bp Neighborhood of RT #1 [28131, 30197] DUF4096 DDE_Tnp_1 RVT-UG28 HTH_XRE Neighborhood of RT #2 [2177173, 2180273] UbiC DUF1566 RVT-DGRs MutS_I Avd_like Neighborhood of RT #3 [2410568, 2417925] DUF1566 RVT-DGRs choice_anch_D choice_anch_D choice_anch_D DUF1566 Methyltransf_31 Feature: gene Location: 28131-28394 bp Ori: AUR50767.1 Feature: domain Description: DUF4096 Location: 28161-28356 bp Feature: domain Description: DUF4096 Location: 281 61 -28356 bp Feature: gene Location: 27602-28129 bp Ori: AUR50767.1 Feature: domain Description: DDE_Tnp_1 Location: 27656-28100 bp Feature: domain Description: DDE_Tnp_1 Location: 27656-281 00 bp Feature: gene Location: 28445-29383 bp Ori: AUR50768.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 28733-29366 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 28733-29366 bp Feature: gene Location: 29611-29790 bp Feature: gene Location: 29964-30197 bp Ori: AUR50770.1 Feature: domain Description: HTH_XRE Location: 29997-30165 bp Feature: domain Description: HTH_XRE Location: 29997-301 65 bp Feature: gene Location: 2177173-2177676 bp Ori: AUR52606.1 Feature: domain Description: UbiC Location: 2177221-2177659 bp Feature: domain Description: UbiC Location: 21 77221 -21 77659 bp Feature: gene Location: 2177920-2178519 bp Ori: AUR52607.1 Feature: domain Description: DUF1566 Location: 2178085-2178508 bp Feature: domain Description: DUF1 566 Location: 21 78085-21 78508 bp Feature: gene Location: 2178512-2179633 bp Ori: AUR52608.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2178578-2178998 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 78578-21 78998 bp Feature: domain Description: MutS_I Location: 2179346-2179568 bp Feature: domain Description: MutS_I Location: 21 79346-21 79568 bp Feature: gene Location: 2179557-2179697 bp Feature: gene Location: 2179899-2180273 bp Ori: AUR52610.1 Feature: domain Description: Avd_like Location: 2179926-2180235 bp Feature: domain Description: Avd_like Location: 21 79926-21 80235 bp Feature: gene Location: 2410568-2410915 bp Feature: gene Location: 2411352-2411960 bp Ori: AUR52795.1 Feature: domain Description: DUF1566 Location: 2411562-2411949 bp Feature: domain Description: DUF1 566 Location: 241 1 562-241 1 949 bp Feature: gene Location: 2412156-2412515 bp Ori: AUR52796.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2412342-2412504 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 241 2342-241 2504 bp Feature: gene Location: 2413339-2416665 bp Ori: AUR52797.1 Feature: domain Description: choice_anch_D Location: 2414257-2414467 bp Feature: domain Description: choice_anch_D Location: 241 4257-241 4467 bp Feature: domain Description: choice_anch_D Location: 2414608-2414905 bp Feature: domain Description: choice_anch_D Location: 241 4608-241 4905 bp Feature: domain Description: choice_anch_D Location: 2414938-2415271 bp Feature: domain Description: choice_anch_D Location: 241 4938-241 5271 bp Feature: domain Description: DUF1566 Location: 2416261-2416654 bp Feature: domain Description: DUF1 566 Location: 241 6261 -241 6654 bp Feature: gene Location: 2417182-2417925 bp Ori: AUR52798.1 Feature: domain Description: Methyltransf_31 Location: 2417320-2417620 bp Feature: domain Description: Methyltransf_31 Location: 241 7320-241 7620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609), RVT-UG28, HTH_XRE (smart00530), UbiC (COG3161), DUF1566 (pfam07603), RVT-DGRs, MutS_I (pfam01624), Avd_like (cd16376), choice_anch_D (NF012200)
Methyltransf_31 (pfam13847)