myRT

myRT report for GCA_002892555.1_ASM289255v1

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Seq: CP025931.1 Porphyromonas gingivalis strain TDC 60 chromosome, complete genome (2334880 bp)
Overview 1 RT 1: 2131422-2138152 bp Neighborhood of RT #1 [2131422, 2138382] OMP_b-brl Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cmr6_III-B cas_Cmr5 Feature: gene Location: 2131422-2132012 bp Ori: AUR48521.1 Feature: domain Description: OMP_b-brl Location: 2131455-2131983 bp Feature: domain Description: OMP_b-brl Location: 21 31 455-21 31 983 bp Feature: gene Location: 2133708-2133998 bp Ori: AUR48866.1 Gene: cas2_2 Feature: domain Description: Cas2_I_II_III Location: 2133729-2133948 bp Feature: domain Description: Cas2_I_II_III Location: 21 33729-21 33948 bp Feature: gene Location: 2134018-2137113 bp Ori: AUR47222.1 Gene: cas1_2 Feature: domain Description: CRISPR_Cas6 Location: 2134552-2134906 bp Feature: domain Description: CRISPR_Cas6 Location: 21 34552-21 34906 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2135056-2135668 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 21 35056-21 35668 bp Feature: domain Description: Cas1_I-II-III Location: 2136118-2137072 bp Feature: domain Description: Cas1 _I-II-III Location: 21 361 1 8-21 37072 bp Feature: gene Location: 2137175-2137948 bp Ori: AUR48265.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 2137250-2137937 bp Feature: domain Description: Cmr6_III-B Location: 21 37250-21 37937 bp Feature: gene Location: 2137945-2138382 bp Ori: AUR48730.1 Gene: cmr5 Feature: domain Description: cas_Cmr5 Location: 2137984-2138152 bp Feature: domain Description: cas_Cmr5 Location: 21 37984-21 381 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OMP_b-brl (pfam13505), Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881)