myRT

myRT report for GCA_002892595.1_ASM289259v1

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Seq: CP025932.1 Porphyromonas gingivalis strain W83 chromosome, complete genome (2343999 bp)
Overview 1 RT 1: 2066812-2073873 bp Neighborhood of RT #1 [2066812, 2073971] OMP_b-brl Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cmr6_III-B cas_Cmr5 Feature: gene Location: 2066812-2067402 bp Ori: AUR46783.1 Feature: domain Description: OMP_b-brl Location: 2066842-2067373 bp Feature: domain Description: OMP_b-brl Location: 2066842-2067373 bp Feature: gene Location: 2069304-2069594 bp Ori: AUR47109.1 Gene: cas2_2 Feature: domain Description: Cas2_I_II_III Location: 2069325-2069544 bp Feature: domain Description: Cas2_I_II_III Location: 2069325-2069544 bp Feature: gene Location: 2069614-2072709 bp Ori: AUR45500.1 Gene: cas1_2 Feature: domain Description: CRISPR_Cas6 Location: 2070148-2070502 bp Feature: domain Description: CRISPR_Cas6 Location: 20701 48-2070502 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2070652-2071264 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2070652-2071 264 bp Feature: domain Description: Cas1_I-II-III Location: 2071714-2072671 bp Feature: domain Description: Cas1 _I-II-III Location: 2071 71 4-2072671 bp Feature: gene Location: 2072770-2073531 bp Ori: AUR46544.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 2072845-2073520 bp Feature: domain Description: Cmr6_III-B Location: 2072845-2073520 bp Feature: gene Location: 2073528-2073971 bp Ori: AUR46970.1 Gene: cmr5 Feature: domain Description: cas_Cmr5 Location: 2073567-2073873 bp Feature: domain Description: cas_Cmr5 Location: 2073567-2073873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OMP_b-brl (pfam13505), Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881)