myRT

myRT report for GCA_002895245.1_ASM289524v1

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Seq: CP025988.1 Lactobacillus plantarum strain LM1004 chromosome, complete genome (3198690 bp)
Overview 1 RT 1: 82193-88155 bp 2 RT 2: 2059750-2065765 bp 3 RT 3: 2949720-2955330 bp Neighborhood of RT #1 [82193, 88202] RVT-GII GIIM P-type_ATPase_H eno Neighborhood of RT #2 [2059750, 2065765] DegQ PRK00103 RVT-UG12 PHA02517 Neighborhood of RT #3 [2949720, 2955338] RVT-GII GIIM fumC PRK06481 Feature: gene Location: 82193-82450 bp Feature: gene Location: 82944-83096 bp Feature: gene Location: 83158-84387 bp Ori: AUS70815.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83266-83884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83266-83884 bp Feature: domain Description: GIIM Note: maturase Location: 83938-84157 bp Feature: domain Description: GIIM Note: maturase Location: 83938-841 57 bp Feature: gene Location: 84600-86873 bp Ori: AUS70816.1 Feature: domain Description: P-type_ATPase_H Location: 84630-86838 bp Feature: domain Description: P-type_ATPase_H Location: 84630-86838 bp Feature: gene Location: 86913-88202 bp Ori: AUS70817.1 Gene: eno_1 Feature: domain Description: eno Location: 86925-88155 bp Feature: domain Description: eno Location: 86925-881 55 bp Feature: gene Location: 2059750-2061012 bp Ori: AUS72689.1 Gene: htrA Feature: domain Description: DegQ Location: 2059870-2060992 bp Feature: domain Description: DegQ Location: 2059870-2060992 bp Feature: gene Location: 2061567-2062046 bp Ori: AUS72690.1 Gene: rlmH Feature: domain Description: PRK00103 Location: 2061570-2062044 bp Feature: domain Description: PRK001 03 Location: 2061 570-2062044 bp Feature: gene Location: 2062120-2063934 bp Ori: AUS72691.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2062639-2063086 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 2062639-2063086 bp Feature: gene Location: 2064756-2065652 bp Ori: AUS72692.1 Feature: domain Description: PHA02517 Location: 2064852-2065623 bp Feature: domain Description: PHA0251 7 Location: 2064852-2065623 bp Feature: gene Location: 2065649-2065765 bp Feature: gene Location: 2949720-2949956 bp Feature: gene Location: 2950535-2950687 bp Feature: gene Location: 2950749-2951837 bp Ori: AUS73518.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950857-2951475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950857-2951 475 bp Feature: domain Description: GIIM Note: maturase Location: 2951529-2951748 bp Feature: domain Description: GIIM Note: maturase Location: 2951 529-2951 748 bp Feature: gene Location: 2952395-2953777 bp Ori: AUS73519.1 Gene: fumC Feature: domain Description: fumC Location: 2952398-2953766 bp Feature: domain Description: fumC Location: 2952398-2953766 bp Feature: gene Location: 2953950-2955338 bp Ori: AUS73520.1 Gene: ifcA_2 Feature: domain Description: PRK06481 Location: 2953989-2955330 bp Feature: domain Description: PRK06481 Location: 2953989-2955330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), P-type_ATPase_H (cd02076), eno (TIGR01060), DegQ (pfam08181), PRK00103 (rRNA large subunit methyltransferase; Provisional), RVT-UG12, PHA02517 (putative transposase OrfB; Reviewed), fumC (PRK00485), PRK06481 (flavocytochrome c)