myRT

myRT report for GCA_002896875.1_ASM289687v1

Download annotations/find similar RTs

Seq: CP023278.1 Nostoc sp. CENA543 chromosome, complete genome (6990729 bp)
Overview 1 RT 1: 1754827-1762688 bp 2 RT 2: 2487267-2492994 bp Neighborhood of RT #1 [1754827, 1762714] MetF PLN02886 RVT_N RVT-GII GIIM HNHc DDE_Tnp_1_3 YkwD Neighborhood of RT #2 [2487267, 2493014] TIR_2 YfmG Avd_like RVT-DGRs YfmG MgtE Feature: gene Location: 1754827-1755762 bp Ori: AUT00205.1 Feature: domain Description: MetF Location: 1754869-1755739 bp Feature: domain Description: MetF Location: 1 754869-1 755739 bp Feature: gene Location: 1755918-1756925 bp Ori: AUT00206.1 Gene: trpS Feature: domain Description: PLN02886 Location: 1755927-1756914 bp Feature: domain Description: PLN02886 Location: 1 755927-1 75691 4 bp Feature: gene Location: 1757470-1759239 bp Ori: AUT00207.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1757518-1757758 bp Feature: domain Description: RVT_N Location: 1 75751 8-1 757758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1757812-1758451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75781 2-1 758451 bp Feature: domain Description: GIIM Note: maturase Location: 1758529-1758757 bp Feature: domain Description: GIIM Note: maturase Location: 1 758529-1 758757 bp Feature: domain Description: HNHc Note: nucleases Location: 1758961-1759120 bp Feature: domain Description: HNHc Note: nucleases Location: 1 758961 -1 7591 20 bp Feature: gene Location: 1760191-1761069 bp Ori: AUT00208.1 Feature: domain Description: DDE_Tnp_1_3 Location: 1760506-1760965 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 1 760506-1 760965 bp Feature: gene Location: 1762172-1762714 bp Ori: AUT00209.1 Feature: domain Description: YkwD Location: 1762262-1762688 bp Feature: domain Description: YkwD Location: 1 762262-1 762688 bp Feature: gene Location: 2487267-2488952 bp Ori: AUT00751.1 Feature: domain Description: TIR_2 Location: 2487291-2487624 bp Feature: domain Description: TIR_2 Location: 2487291 -2487624 bp Feature: domain Description: YfmG Location: 2488059-2488935 bp Feature: domain Description: YfmG Location: 2488059-2488935 bp Feature: gene Location: 2489061-2489432 bp Ori: AUT00752.1 Feature: domain Description: Avd_like Location: 2489079-2489385 bp Feature: domain Description: Avd_like Location: 2489079-2489385 bp Feature: gene Location: 2489441-2490511 bp Ori: AUT00753.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2489651-2490392 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2489651 -2490392 bp Feature: gene Location: 2490775-2490885 bp Feature: domain Description: YfmG Location: 2490778-2490886 bp Feature: domain Description: YfmG Location: 2490778-2490886 bp Feature: gene Location: 2491662-2493014 bp Ori: AUT00754.1 Gene: mgtE Feature: domain Description: MgtE Location: 2491704-2492994 bp Feature: domain Description: MgtE Location: 2491 704-2492994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetF (COG0685), PLN02886 (aminoacyl-tRNA ligase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DDE_Tnp_1_3 (pfam13612), YkwD (COG2340), TIR_2 (pfam13676), YfmG (COG1262)
Avd_like (cd16376), RVT-DGRs, MgtE (pfam01769)