myRT

myRT report for GCA_002903005.1_ASM290300v1

Download annotations/find similar RTs

Seq: CP026177.1 Klebsiella pneumoniae strain KPNIH50 chromosome, complete genome (5616605 bp)
Overview 1 RT 1: 470425-474559 bp 2 RT 2: 634324-638422 bp 3 RT 3: 986960-989915 bp 4 RT 4: 4479357-4482631 bp 5 RT 5: 4599195-4603234 bp 6 RT 6: 4813957-4818828 bp Neighborhood of RT #1 [470425, 474559] umuC PRK10276 RVT-GII Neighborhood of RT #2 [634324, 638433] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [986960, 989915] RVT-GII HTH_Hin_like Neighborhood of RT #4 [4479357, 4482636] PRK10597 RVT-GII PRK05451 Neighborhood of RT #5 [4599195, 4603236] HTH_Hin_like RVT-GII PRK10276 umuC Neighborhood of RT #6 [4813957, 4818842] dacD RVT-GII PRK10016 YccC Feature: gene Location: 470425-471690 bp Ori: AUV36359.1 Feature: domain Description: umuC Location: 470428-471688 bp Feature: domain Description: umuC Location: 470428-471 688 bp Feature: gene Location: 471692-472111 bp Ori: AUV36360.1 Feature: domain Description: PRK10276 Location: 471695-472106 bp Feature: domain Description: PRK1 0276 Location: 471 695-4721 06 bp Feature: gene Location: 472191-473675 bp Ori: AUV36361.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472593-473283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472593-473283 bp Feature: gene Location: 473675-473926 bp Feature: gene Location: 474470-474559 bp Feature: gene Location: 634324-635589 bp Ori: AUV36533.1 Feature: domain Description: umuC Location: 634327-635587 bp Feature: domain Description: umuC Location: 634327-635587 bp Feature: gene Location: 635592-636011 bp Ori: AUV36534.1 Feature: domain Description: PRK10276 Location: 635595-636006 bp Feature: domain Description: PRK1 0276 Location: 635595-636006 bp Feature: gene Location: 636090-637574 bp Ori: AUV36535.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 636492-637182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 636492-6371 82 bp Feature: gene Location: 637574-637825 bp Feature: gene Location: 638191-638433 bp Ori: AUV36537.1 Feature: domain Description: DinI Location: 638242-638422 bp Feature: domain Description: DinI Location: 638242-638422 bp Feature: gene Location: 986960-987199 bp Feature: gene Location: 987352-987603 bp Feature: gene Location: 987603-989087 bp Ori: AUV36852.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988005-988695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988005-988695 bp Feature: gene Location: 989219-989422 bp Feature: domain Description: HTH_Hin_like Location: 989276-989393 bp Feature: domain Description: HTH_Hin_like Location: 989276-989393 bp Feature: gene Location: 989535-989915 bp Feature: gene Location: 4479357-4479608 bp Ori: AUV40065.1 Feature: domain Description: PRK10597 Location: 4479360-4479597 bp Feature: domain Description: PRK1 0597 Location: 4479360-4479597 bp Feature: gene Location: 4479762-4480013 bp Feature: gene Location: 4480013-4481497 bp Ori: AUV40067.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4480415-4481105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448041 5-4481 1 05 bp Feature: gene Location: 4481490-4481564 bp Feature: gene Location: 4481590-4482636 bp Ori: AUV40068.1 Feature: domain Description: PRK05451 Location: 4481605-4482631 bp Feature: domain Description: PRK05451 Location: 4481 605-4482631 bp Feature: gene Location: 4599195-4599377 bp Ori: AUV40187.1 Feature: domain Description: HTH_Hin_like Location: 4599243-4599363 bp Feature: domain Description: HTH_Hin_like Location: 4599243-4599363 bp Feature: gene Location: 4599735-4599986 bp Feature: gene Location: 4599986-4601470 bp Ori: AUV40189.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4600388-4601078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4600388-4601 078 bp Feature: gene Location: 4601550-4601969 bp Ori: AUV40190.1 Feature: domain Description: PRK10276 Location: 4601553-4601964 bp Feature: domain Description: PRK1 0276 Location: 4601 553-4601 964 bp Feature: gene Location: 4601971-4603236 bp Ori: AUV40191.1 Feature: domain Description: umuC Location: 4601974-4603234 bp Feature: domain Description: umuC Location: 4601 974-4603234 bp Feature: gene Location: 4813957-4815126 bp Ori: AUV40359.1 Feature: domain Description: dacD Location: 4813966-4815121 bp Feature: domain Description: dacD Location: 481 3966-481 51 21 bp Feature: gene Location: 4815395-4815646 bp Feature: gene Location: 4815646-4817130 bp Ori: AUV40361.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4816048-4816738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481 6048-481 6738 bp Feature: gene Location: 4817212-4817685 bp Ori: AUV40362.1 Feature: domain Description: PRK10016 Location: 4817215-4817674 bp Feature: domain Description: PRK1 001 6 Location: 481 721 5-481 7674 bp Feature: gene Location: 4817784-4818842 bp Ori: AUV40363.1 Feature: domain Description: YccC Location: 4817790-4818828 bp Feature: domain Description: YccC Location: 481 7790-481 8828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), HTH_Hin_like (cd00569), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05451 (dihydroorotase; Provisional), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: CP026172.1 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence (243967 bp)
Overview 1 RT 1: 39382-43221 bp Neighborhood of RT #1 [39382, 43241] INT_Cre_C RVT-GII HHA Feature: gene Location: 39382-39699 bp Feature: gene Location: 39765-40901 bp Ori: AUV35284.1 Feature: domain Description: INT_Cre_C Location: 40188-40842 bp Feature: domain Description: INT_Cre_C Location: 40188-40842 bp Feature: gene Location: 40987-42471 bp Ori: AUV35285.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41389-42079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41389-42 079 bp Feature: gene Location: 42471-42722 bp Feature: gene Location: 42987-43241 bp Ori: AUV35287.1 Feature: domain Description: HHA Location: 43038-43221 bp Feature: domain Description: HHA Location: 43038-432 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: CP026173.1 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-c4ac, complete sequence (64271 bp)
Overview 1 RT 1: 50534-54616 bp Neighborhood of RT #1 [50534, 54753] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 50534-50965 bp Ori: AUV35557.1 Feature: domain Description: PRK10276 Location: 50585-50948 bp Feature: domain Description: PRK10276 Location: 50585-50948 bp Feature: gene Location: 51124-51375 bp Feature: gene Location: 51375-52859 bp Ori: AUV35559.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51777-52467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51777-52467 bp Feature: gene Location: 53108-54079 bp Ori: AUV35560.1 Feature: domain Description: StbA Location: 53111-54056 bp Feature: domain Description: StbA Location: 53 111-54056 bp Feature: gene Location: 54082-54753 bp Ori: AUV35561.1 Feature: domain Description: Plasmid_stab_B Location: 54097-54304 bp Feature: domain Description: Plasmid_stab_B Location: 54097-543 04 bp Feature: domain Description: Plasmid_stab_B Location: 54409-54616 bp Feature: domain Description: Plasmid_stab_B Location: 54409-54616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: CP026175.1 Klebsiella pneumoniae strain KPNIH50 plasmid pKPC-0cc9, complete sequence (172259 bp)
Overview 1 RT 1: 8973-13045 bp Neighborhood of RT #1 [8973, 13182] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 8973-9398 bp Ori: AUV35696.1 Feature: domain Description: PRK10276 Location: 8976-9384 bp Feature: domain Description: PRK10276 Location: 8976-9384 bp Feature: gene Location: 9553-9804 bp Feature: gene Location: 9804-11288 bp Ori: AUV35698.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10206-10896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10206-10896 bp Feature: gene Location: 11537-12508 bp Ori: AUV35699.1 Feature: domain Description: StbA Location: 11540-12485 bp Feature: domain Description: StbA Location: 1154 0-124 85 bp Feature: gene Location: 12511-13182 bp Ori: AUV35700.1 Feature: domain Description: Plasmid_stab_B Location: 12526-12733 bp Feature: domain Description: Plasmid_stab_B Location: 12526-12733 bp Feature: domain Description: Plasmid_stab_B Location: 12838-13045 bp Feature: domain Description: Plasmid_stab_B Location: 12838-1304 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)