myRT

myRT report for GCA_002903025.1_ASM290302v1

Download annotations/find similar RTs

Seq: CP026182.1 Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-0c4e, complete sequence (61178 bp)
Overview 1 RT 1: 13592-17045 bp Neighborhood of RT #1 [13592, 17083] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 13592-14023 bp Ori: AUU98984.1 Feature: domain Description: PRK10276 Location: 13643-14006 bp Feature: domain Description: PRK1 0276 Location: 1 3643-1 4006 bp Feature: gene Location: 14181-14432 bp Feature: gene Location: 14432-15916 bp Ori: AUU98986.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14834-15524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4834-1 5524 bp Feature: gene Location: 16068-16765 bp Feature: domain Description: Zn_Tnp_IS1 Location: 16074-16176 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 6074-1 61 76 bp Feature: domain Description: HTH_Tnp_IS1 Location: 16197-16329 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 61 97-1 6329 bp Feature: gene Location: 16775-17083 bp Feature: domain Description: Rep_3 Location: 16781-17045 bp Feature: domain Description: Rep_3 Location: 1 6781 -1 7045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: CP026179.1 Klebsiella pneumoniae strain KPNIH49 plasmid pKPC-224e, complete sequence (237571 bp)
Overview 1 RT 1: 120578-124051 bp Neighborhood of RT #1 [120578, 124050] PHA02517 RVT-GII GIIM InsE PHA02517 Feature: gene Location: 120578-120790 bp Feature: gene Location: 120938-121117 bp Feature: domain Description: PHA02517 Location: 120941-121118 bp Feature: domain Description: PHA02 517 Location: 12 0941-12 1118 bp Feature: gene Location: 121198-122721 bp Ori: AUU98623.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121471-122203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1471-12 2 2 03 bp Feature: domain Description: GIIM Note: maturase Location: 122278-122476 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 2 78-12 2 476 bp Feature: gene Location: 123015-123452 bp Feature: gene Location: 123379-124050 bp Feature: domain Description: InsE Location: 123391-123643 bp Feature: domain Description: InsE Location: 12 3391-12 3643 bp Feature: domain Description: PHA02517 Location: 123715-124051 bp Feature: domain Description: PHA02 517 Location: 12 3715-12 4051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: CP026178.1 Klebsiella pneumoniae strain KPNIH49 chromosome, complete genome (5403218 bp)
Overview 1 RT 1: 520102-524209 bp 2 RT 2: 660160-664293 bp 3 RT 3: 3708953-3713175 bp Neighborhood of RT #1 [520102, 524211] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [660160, 664295] RVT-GII PRK10276 umuC Neighborhood of RT #3 [3708953, 3713175] PRK08155 IlvB_leader RVT-GII Feature: gene Location: 520102-520344 bp Ori: AUU93763.1 Feature: domain Description: DinI Location: 520153-520333 bp Feature: domain Description: DinI Location: 520153 -5203 3 3 bp Feature: gene Location: 520710-520961 bp Feature: gene Location: 520961-522445 bp Ori: AUU93765.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521363-522053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5213 63 -522053 bp Feature: gene Location: 522524-522943 bp Ori: AUU93766.1 Feature: domain Description: PRK10276 Location: 522527-522938 bp Feature: domain Description: PRK10276 Location: 522527-52293 8 bp Feature: gene Location: 522946-524211 bp Ori: AUU93767.1 Feature: domain Description: umuC Location: 522949-524209 bp Feature: domain Description: umuC Location: 522949-524209 bp Feature: gene Location: 660160-660249 bp Feature: gene Location: 660794-661045 bp Feature: gene Location: 661045-662529 bp Ori: AUU93897.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661447-662137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661447-66213 7 bp Feature: gene Location: 662609-663028 bp Ori: AUU98305.1 Feature: domain Description: PRK10276 Location: 662612-663023 bp Feature: domain Description: PRK10276 Location: 662612-663 023 bp Feature: gene Location: 663030-664295 bp Ori: AUU93898.1 Feature: domain Description: umuC Location: 663033-664293 bp Feature: domain Description: umuC Location: 663 03 3 -664293 bp Feature: gene Location: 3708953-3710641 bp Ori: AUU96743.1 Gene: ilvB Feature: domain Description: PRK08155 Location: 3708956-3710639 bp Feature: domain Description: PRK08155 Location: 3 708956-3 71063 9 bp Feature: gene Location: 3710746-3710841 bp Ori: AUU96744.1 Feature: domain Description: IlvB_leader Location: 3710749-3710839 bp Feature: domain Description: IlvB_leader Location: 3 710749-3 71083 9 bp Feature: gene Location: 3711203-3712687 bp Ori: AUU96745.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3711605-3712295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 711605-3 712295 bp Feature: gene Location: 3712687-3712938 bp Feature: gene Location: 3712987-3713175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PRK08155 (acetolactate synthase large subunit), IlvB_leader (pfam08049)

Seq: CP026186.1 Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-3967, complete sequence (373179 bp)
Overview 1 RT 1: 43644-47492 bp 2 RT 2: 220312-224117 bp Neighborhood of RT #1 [43644, 47492] HHA RVT-GII INT_Cre_C Neighborhood of RT #2 [220312, 224131] cas7_csf2 RVT-GII PRK10276 Feature: gene Location: 43644-43898 bp Ori: AUU99182.1 Feature: domain Description: HHA Location: 43695-43878 bp Feature: domain Description: HHA Location: 4 3695-4 3878 bp Feature: gene Location: 44190-44402 bp Feature: gene Location: 44402-45887 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44804-45338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 804 -4 5338 bp Feature: gene Location: 45973-47109 bp Ori: AUU99184.1 Feature: domain Description: INT_Cre_C Location: 46396-47050 bp Feature: domain Description: INT_Cre_C Location: 4 6396-4 7050 bp Feature: gene Location: 47175-47492 bp Feature: gene Location: 220312-221103 bp Ori: AUU99353.1 Feature: domain Description: cas7_csf2 Location: 220633-221047 bp Feature: domain Description: cas7_csf2 Location: 220633-22104 7 bp Feature: gene Location: 221304-221600 bp Feature: gene Location: 221814-223298 bp Ori: AUU99355.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222216-222906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222216-222906 bp Feature: gene Location: 223298-223549 bp Feature: gene Location: 223709-224131 bp Ori: AUU99357.1 Feature: domain Description: PRK10276 Location: 223715-224117 bp Feature: domain Description: PRK10276 Location: 223715-224 117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799), cas7_csf2 (TIGR03115), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP026180.1 Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-9729, complete sequence (97198 bp)
Overview 1 RT 1: 1142-5337 bp 2 RT 2: 17079-20174 bp 3 RT 3: 26384-29729 bp Neighborhood of RT #1 [1142, 5351] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Neighborhood of RT #2 [17079, 20568] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #3 [26384, 29729] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 1142-1813 bp Ori: AUU98759.1 Feature: domain Description: Plasmid_stab_B Location: 1157-1364 bp Feature: domain Description: Plasmid_stab_B Location: 115 7-1364 bp Feature: domain Description: Plasmid_stab_B Location: 1469-1676 bp Feature: domain Description: Plasmid_stab_B Location: 1469-1676 bp Feature: gene Location: 1816-2787 bp Ori: AUU98760.1 Feature: domain Description: StbA Location: 1819-2764 bp Feature: domain Description: StbA Location: 1819-2764 bp Feature: gene Location: 3036-4520 bp Ori: AUU98761.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438-4128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438-4128 bp Feature: gene Location: 4520-4771 bp Feature: gene Location: 4926-5351 bp Ori: AUU98763.1 Feature: domain Description: PRK10276 Location: 4929-5337 bp Feature: domain Description: PRK10276 Location: 4929-5 337 bp Feature: gene Location: 17079-17291 bp Feature: gene Location: 17439-17618 bp Feature: domain Description: PHA02517 Location: 17442-17619 bp Feature: domain Description: PHA025 17 Location: 17442-17619 bp Feature: gene Location: 17699-19222 bp Ori: AUU98774.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17972-18704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17972-18704 bp Feature: domain Description: GIIM Note: maturase Location: 18779-18977 bp Feature: domain Description: GIIM Note: maturase Location: 18779-18977 bp Feature: gene Location: 19516-19953 bp Feature: gene Location: 19880-20568 bp Feature: domain Description: InsE Location: 19889-20174 bp Feature: domain Description: InsE Location: 19889-20174 bp Feature: gene Location: 26384-26928 bp Feature: domain Description: InsE Location: 26393-26534 bp Feature: domain Description: InsE Location: 26393-265 34 bp Feature: gene Location: 26855-27292 bp Feature: gene Location: 27586-29109 bp Ori: AUU98783.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27859-28591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2785 9-285 91 bp Feature: domain Description: GIIM Note: maturase Location: 28666-28864 bp Feature: domain Description: GIIM Note: maturase Location: 28666-28864 bp Feature: gene Location: 29190-29369 bp Feature: domain Description: PHA02517 Location: 29193-29370 bp Feature: domain Description: PHA025 17 Location: 29193-29370 bp Feature: gene Location: 29517-29729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963)