myRT

myRT report for GCA_002903305.1_ASM290330v1

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Seq: CP026241.1 Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-e790, complete sequence (200651 bp)
Overview 1 RT 1: 127856-131601 bp Neighborhood of RT #1 [127856, 131601] PHA02517 RVT-GII GIIM Feature: gene Location: 127856-128281 bp Feature: gene Location: 128434-128910 bp Feature: domain Description: PHA02517 Location: 128437-128902 bp Feature: domain Description: PHA0251 7 Location: 1 28437-1 28902 bp Feature: gene Location: 128991-130514 bp Ori: AUV46376.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129264-129996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29264-1 29996 bp Feature: domain Description: GIIM Note: maturase Location: 130071-130269 bp Feature: domain Description: GIIM Note: maturase Location: 1 30071 -1 30269 bp Feature: gene Location: 130808-131218 bp Feature: gene Location: 131172-131601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP026242.1 Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence (355789 bp)
Overview 1 RT 1: 109529-112606 bp 2 RT 2: 303880-308168 bp Neighborhood of RT #1 [109529, 113015] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [303880, 308173] RVT-GII GIIM PHA02517 quinone_pig3 Feature: gene Location: 109529-109741 bp Feature: gene Location: 109889-110068 bp Feature: domain Description: PHA02517 Location: 109892-110069 bp Feature: domain Description: PHA02 517 Location: 109892 -110069 bp Feature: gene Location: 110149-111672 bp Ori: AUV46569.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110422-111154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11042 2 -111154 bp Feature: domain Description: GIIM Note: maturase Location: 111229-111427 bp Feature: domain Description: GIIM Note: maturase Location: 1112 2 9-11142 7 bp Feature: gene Location: 111966-112337 bp Feature: gene Location: 112330-113015 bp Feature: domain Description: InsE Location: 112342-112606 bp Feature: domain Description: InsE Location: 112 342 -112 606 bp Feature: gene Location: 303880-304309 bp Feature: gene Location: 304263-304673 bp Feature: gene Location: 304967-306490 bp Ori: AUV46742.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305240-305972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3052 40-305972 bp Feature: domain Description: GIIM Note: maturase Location: 306047-306245 bp Feature: domain Description: GIIM Note: maturase Location: 306047-3062 45 bp Feature: gene Location: 306571-307047 bp Feature: domain Description: PHA02517 Location: 306574-307039 bp Feature: domain Description: PHA02 517 Location: 306574-307039 bp Feature: gene Location: 307193-308173 bp Ori: AUV46816.1 Feature: domain Description: quinone_pig3 Location: 307196-308168 bp Feature: domain Description: quinone_pig3 Location: 307196-308168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), quinone_pig3 (TIGR02824)

Seq: CP026238.1 Citrobacter freundii complex sp. CFNIH9 chromosome, complete genome (5016446 bp)
Overview 1 RT 1: 3409436-3414341 bp Neighborhood of RT #1 [3409436, 3414346] nrfE PRK13150 RVT-GII GIIM PRK13150 CcmD Feature: gene Location: 3409436-3411391 bp Ori: AUV44511.1 Feature: domain Description: nrfE Location: 3409595-3411338 bp Feature: domain Description: nrfE Location: 3 409595-3 4113 3 8 bp Feature: gene Location: 3411388-3411600 bp Feature: domain Description: PRK13150 Location: 3411403-3411598 bp Feature: domain Description: PRK13 150 Location: 3 411403 -3 411598 bp Feature: gene Location: 3411672-3413195 bp Ori: AUV44512.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3411945-3412677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 411945-3 412677 bp Feature: domain Description: GIIM Note: maturase Location: 3412752-3412950 bp Feature: domain Description: GIIM Note: maturase Location: 3 412752-3 412950 bp Feature: gene Location: 3413828-3414137 bp Feature: domain Description: PRK13150 Location: 3413831-3414113 bp Feature: domain Description: PRK13 150 Location: 3 413 83 1-3 414113 bp Feature: gene Location: 3414134-3414346 bp Ori: AUV44513.1 Gene: ccmD Feature: domain Description: CcmD Location: 3414143-3414341 bp Feature: domain Description: CcmD Location: 3 414143 -3 4143 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nrfE (TIGR00353), PRK13150 (cytochrome c maturation protein CcmE), RVT-GII, GIIM (pfam08388), CcmD (pfam04995)