myRT

myRT report for GCA_002906415.1_ASM290641v1

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Seq: CP026280.1 Klebsiella oxytoca strain KONIH2 plasmid pKPC-55bf, complete sequence (152041 bp)
Overview 1 RT 1: 41501-45583 bp 2 RT 2: 117230-121523 bp Neighborhood of RT #1 [41501, 45720] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Neighborhood of RT #2 [117230, 121531] InsE PHA02517 RVT-GII GIIM PHA02517 APH Feature: gene Location: 41501-41932 bp Ori: AUW07922.1 Feature: domain Description: PRK10276 Location: 41552-41915 bp Feature: domain Description: PRK1 0276 Location: 41 552-41 91 5 bp Feature: gene Location: 42091-42342 bp Feature: gene Location: 42342-43826 bp Ori: AUW07924.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42744-43434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42744-43434 bp Feature: gene Location: 44075-45046 bp Ori: AUW07925.1 Feature: domain Description: StbA Location: 44078-45023 bp Feature: domain Description: StbA Location: 44078-45023 bp Feature: gene Location: 45049-45720 bp Ori: AUW07926.1 Feature: domain Description: Plasmid_stab_B Location: 45064-45271 bp Feature: domain Description: Plasmid_stab_B Location: 45064-45271 bp Feature: domain Description: Plasmid_stab_B Location: 45376-45583 bp Feature: domain Description: Plasmid_stab_B Location: 45376-45583 bp Feature: gene Location: 117230-117901 bp Feature: domain Description: InsE Location: 117242-117494 bp Feature: domain Description: InsE Location: 1 1 7242-1 1 7494 bp Feature: domain Description: PHA02517 Location: 117566-117902 bp Feature: domain Description: PHA0251 7 Location: 1 1 7566-1 1 7902 bp Feature: gene Location: 117828-118265 bp Feature: gene Location: 118559-120082 bp Ori: AUW08010.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118832-119564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8832-1 1 9564 bp Feature: domain Description: GIIM Note: maturase Location: 119639-119837 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 9639-1 1 9837 bp Feature: gene Location: 120163-120621 bp Feature: domain Description: PHA02517 Location: 120166-120613 bp Feature: domain Description: PHA0251 7 Location: 1 201 66-1 2061 3 bp Feature: gene Location: 120728-121531 bp Ori: AUW08011.1 Feature: domain Description: APH Location: 120770-121523 bp Feature: domain Description: APH Location: 1 20770-1 21 523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), APH (pfam01636)

Seq: CP026281.1 Klebsiella oxytoca strain KONIH2 plasmid pKOR-01e8, complete sequence (198115 bp)
Overview 1 RT 1: 130114-136058 bp Neighborhood of RT #1 [130114, 136144] PRK15442 PRK13746 RVT-GII GIIM efflux_Bcr_CflA LbH_XAT Feature: gene Location: 130114-130980 bp Ori: AUW08277.1 Feature: domain Description: PRK15442 Location: 130147-130954 bp Feature: domain Description: PRK15442 Location: 130147-130954 bp Feature: gene Location: 131098-131889 bp Ori: AUW08278.1 Feature: domain Description: PRK13746 Location: 131101-131881 bp Feature: domain Description: PRK13746 Location: 131101-131881 bp Feature: gene Location: 131978-133327 bp Ori: AUW08203.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132260-132878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 2 60-132 878 bp Feature: domain Description: GIIM Note: maturase Location: 132926-133130 bp Feature: domain Description: GIIM Note: maturase Location: 132 92 6-133130 bp Feature: gene Location: 134128-135387 bp Ori: AUW08279.1 Gene: cmlA Feature: domain Description: efflux_Bcr_CflA Location: 134161-135304 bp Feature: domain Description: efflux_Bcr_CflA Location: 134161-135304 bp Feature: gene Location: 135512-136144 bp Ori: AUW08204.1 Gene: catB Feature: domain Description: LbH_XAT Location: 135578-136058 bp Feature: domain Description: LbH_XAT Location: 135578-136058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15442 (beta-lactamase TEM; Provisional), PRK13746 (aminoglycoside resistance protein; Provisional), RVT-GII, GIIM (pfam08388), efflux_Bcr_CflA (TIGR00710), LbH_XAT (cd03349)

Seq: CP026283.1 Klebsiella oxytoca strain KONIH2 plasmid pKOR-e6bf, complete sequence (125961 bp)
Overview 1 RT 1: 37605-42551 bp Neighborhood of RT #1 [37605, 42565] RVT-GII RVT-GII PRK10276 Feature: gene Location: 37605-37811 bp Feature: gene Location: 37877-38107 bp Feature: gene Location: 38341-39825 bp Ori: AUW08598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38743-39433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8743 -3 943 3 bp Feature: gene Location: 39825-40076 bp Feature: gene Location: 40250-41734 bp Ori: AUW08600.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40652-41342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40652-413 42 bp Feature: gene Location: 41734-41985 bp Feature: gene Location: 42140-42565 bp Ori: AUW08602.1 Feature: domain Description: PRK10276 Location: 42143-42551 bp Feature: domain Description: PRK10276 Location: 42143 -42551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP026285.1 Klebsiella oxytoca strain KONIH2 chromosome, complete genome (6190364 bp)
Overview 1 RT 1: 220927-233196 bp 2 RT 2: 506887-511975 bp 3 RT 3: 1984865-1992411 bp 4 RT 4: 2113383-2117334 bp 5 RT 5: 3551892-3554566 bp Neighborhood of RT #1 [220927, 233198] PinE RVT-GII RVT-GII RVT-GII RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #2 [506887, 511989] Caps_assemb_Wzi RVT-GII PRK10016 YccC Neighborhood of RT #3 [1984865, 1992411] tape_meas_TP901 COG5283 COG3499 RVT-Retrons COG5301 Neighborhood of RT #4 [2113383, 2117339] PRK10598 PRK05451 RVT-GII PRK10597 Neighborhood of RT #5 [3551892, 3554568] TisB_tox RVT-GII IlvB_leader Feature: gene Location: 220927-221478 bp Ori: AUW09045.1 Feature: domain Description: PinE Location: 220930-221464 bp Feature: domain Description: PinE Location: 220930-2214 64 bp Feature: gene Location: 222061-222312 bp Feature: gene Location: 222312-223796 bp Ori: AUW09047.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222714-223404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222714 -2234 04 bp Feature: gene Location: 223970-224221 bp Feature: gene Location: 224221-225705 bp Ori: AUW09049.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224623-225313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224 623-225313 bp Feature: gene Location: 225764-225997 bp Feature: gene Location: 226130-227614 bp Ori: AUW09050.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226532-227222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226532-227222 bp Feature: gene Location: 227788-228039 bp Feature: gene Location: 228039-229523 bp Ori: AUW09052.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228441-229131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2284 4 1-229131 bp Feature: gene Location: 229582-229815 bp Feature: gene Location: 229948-231432 bp Ori: AUW09053.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230350-231040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230350-23104 0 bp Feature: gene Location: 231512-231931 bp Ori: AUW14304.1 Feature: domain Description: PRK10276 Location: 231515-231926 bp Feature: domain Description: PRK10276 Location: 231515-231926 bp Feature: gene Location: 231933-233198 bp Ori: AUW09054.1 Feature: domain Description: umuC Location: 231936-233196 bp Feature: domain Description: umuC Location: 231936-233196 bp Feature: gene Location: 506887-508323 bp Ori: AUW09277.1 Feature: domain Description: Caps_assemb_Wzi Location: 507157-508282 bp Feature: domain Description: Caps_assemb_Wzi Location: 507157-508282 bp Feature: gene Location: 508542-508793 bp Feature: gene Location: 508793-510277 bp Ori: AUW09279.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509195-509885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 509195-509885 bp Feature: gene Location: 510359-510832 bp Ori: AUW09280.1 Feature: domain Description: PRK10016 Location: 510362-510821 bp Feature: domain Description: PRK10016 Location: 510362-510821 bp Feature: gene Location: 510931-511989 bp Ori: AUW09281.1 Feature: domain Description: YccC Location: 510937-511975 bp Feature: domain Description: YccC Location: 510937-511975 bp Feature: gene Location: 1984865-1987840 bp Ori: AUW10590.1 Feature: domain Description: tape_meas_TP901 Location: 1985429-1986479 bp Feature: domain Description: tape_meas_TP901 Location: 19854 29-19864 79 bp Feature: domain Description: COG5283 Location: 1986851-1987244 bp Feature: domain Description: COG5283 Location: 1986851-198724 4 bp Feature: gene Location: 1987856-1988347 bp Ori: AUW10591.1 Feature: domain Description: COG3499 Location: 1987859-1988291 bp Feature: domain Description: COG34 99 Location: 1987859-1988291 bp Feature: gene Location: 1988561-1990402 bp Ori: AUW10592.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1988696-1989395 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1988696-1989395 bp Feature: gene Location: 1991114-1992211 bp Ori: AUW10593.1 Feature: domain Description: COG5301 Location: 1991135-1991711 bp Feature: domain Description: COG5301 Location: 1991135-1991711 bp Feature: gene Location: 1992196-1992411 bp Feature: gene Location: 2113383-2113943 bp Ori: AUW10709.1 Feature: domain Description: PRK10598 Location: 2113386-2113941 bp Feature: domain Description: PRK10598 Location: 2113386-211394 1 bp Feature: gene Location: 2114066-2115112 bp Ori: AUW10710.1 Feature: domain Description: PRK05451 Location: 2114081-2115107 bp Feature: domain Description: PRK054 51 Location: 2114 081-2115107 bp Feature: gene Location: 2115205-2116689 bp Ori: AUW10711.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2115607-2116297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2115607-2116297 bp Feature: gene Location: 2116689-2116940 bp Feature: gene Location: 2117094-2117339 bp Ori: AUW10713.1 Feature: domain Description: PRK10597 Location: 2117097-2117334 bp Feature: domain Description: PRK10597 Location: 2117097-2117334 bp Feature: gene Location: 3551892-3551981 bp Ori: AUW11981.1 Gene: tisB Feature: domain Description: TisB_tox Location: 3551895-3551979 bp Feature: domain Description: TisB_tox Location: 3551895-3551979 bp Feature: gene Location: 3552253-3552492 bp Feature: gene Location: 3552625-3554109 bp Ori: AUW11982.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3553027-3553717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3553027-3553717 bp Feature: gene Location: 3554203-3554409 bp Feature: gene Location: 3554473-3554568 bp Ori: AUW11984.1 Feature: domain Description: IlvB_leader Location: 3554476-3554566 bp Feature: domain Description: IlvB_leader Location: 3554 4 76-3554 566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Caps_assemb_Wzi (pfam14052), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), tape_meas_TP901 (TIGR01760), COG5283 (Phage-related tail protein ), COG3499 (Phage protein U )
RVT-Retrons, COG5301 (Phage-related tail fibre protein ), PRK10598 (lipoprotein; Provisional), PRK05451 (dihydroorotase; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), TisB_tox (TIGR04459), IlvB_leader (pfam08049)