myRT

myRT report for GCA_002918585.2_ASM291858v2

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Seq: CP036450.1 Klebsiella pneumoniae strain KPNIH45 chromosome, complete genome (5316773 bp)
Overview 1 RT 1: 2018767-2023629 bp 2 RT 2: 2375520-2379628 bp 3 RT 3: 2687537-2692211 bp Neighborhood of RT #1 [2018767, 2023655] int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [2375520, 2379630] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2687537, 2692216] XerC RVT-GII PRK10276 umuC Feature: gene Location: 2018767-2019819 bp Ori: QBI92626.1 Feature: domain Description: int Location: 2018770-2019769 bp Feature: domain Description: int Location: 201 8770-201 9769 bp Feature: gene Location: 2019987-2020238 bp Feature: gene Location: 2020238-2021722 bp Ori: QBI92628.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2020640-2021330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2020640-2021 330 bp Feature: gene Location: 2021821-2022765 bp Feature: gene Location: 2022777-2023655 bp Ori: QBI92630.1 Feature: domain Description: Phage_CI_repr Location: 2022804-2022987 bp Feature: domain Description: Phage_CI_repr Location: 2022804-2022987 bp Feature: domain Description: Phage_CI_repr Location: 2023116-2023308 bp Feature: domain Description: Phage_CI_repr Location: 20231 1 6-2023308 bp Feature: domain Description: Phage_CI_C Location: 2023335-2023629 bp Feature: domain Description: Phage_CI_C Location: 2023335-2023629 bp Feature: gene Location: 2375520-2375762 bp Ori: QBI92950.1 Feature: domain Description: DinI Location: 2375571-2375751 bp Feature: domain Description: DinI Location: 2375571 -2375751 bp Feature: gene Location: 2376129-2376380 bp Feature: gene Location: 2376380-2377864 bp Ori: QBI92952.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2376782-2377472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2376782-2377472 bp Feature: gene Location: 2377943-2378362 bp Ori: QBI92953.1 Feature: domain Description: PRK10276 Location: 2377946-2378357 bp Feature: domain Description: PRK1 0276 Location: 2377946-2378357 bp Feature: gene Location: 2378365-2379630 bp Ori: QBI92954.1 Feature: domain Description: umuC Location: 2378368-2379628 bp Feature: domain Description: umuC Location: 2378368-2379628 bp Feature: gene Location: 2687537-2687959 bp Ori: QBI93272.1 Feature: domain Description: XerC Location: 2687612-2687918 bp Feature: domain Description: XerC Location: 268761 2-268791 8 bp Feature: gene Location: 2688595-2688834 bp Feature: gene Location: 2688967-2690451 bp Ori: QBI93273.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2689369-2690059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2689369-2690059 bp Feature: gene Location: 2690530-2690949 bp Ori: QBI93274.1 Feature: domain Description: PRK10276 Location: 2690533-2690944 bp Feature: domain Description: PRK1 0276 Location: 2690533-2690944 bp Feature: gene Location: 2690951-2692216 bp Ori: QBI93275.1 Feature: domain Description: umuC Location: 2690954-2692211 bp Feature: domain Description: umuC Location: 2690954-269221 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973)

Seq: CP036447.1 Klebsiella pneumoniae strain KPNIH45 plasmid unnamed2, complete sequence (87465 bp)
Overview 1 RT 1: 68687-72140 bp Neighborhood of RT #1 [68687, 72178] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 68687-69118 bp Ori: QBI90709.1 Feature: domain Description: PRK10276 Location: 68738-69101 bp Feature: domain Description: PRK102 76 Location: 68738-69101 bp Feature: gene Location: 69276-69527 bp Feature: gene Location: 69527-71011 bp Ori: QBI90711.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69929-70619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6992 9-70619 bp Feature: gene Location: 71163-71860 bp Feature: domain Description: Zn_Tnp_IS1 Location: 71169-71271 bp Feature: domain Description: Zn_Tnp_IS1 Location: 71169-712 71 bp Feature: domain Description: HTH_Tnp_IS1 Location: 71292-71424 bp Feature: domain Description: HTH_Tnp_IS1 Location: 712 92 -7142 4 bp Feature: gene Location: 71870-72178 bp Feature: domain Description: Rep_3 Location: 71876-72140 bp Feature: domain Description: Rep_3 Location: 71876-72 140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)